Agrobacterium tumefaciens Ach5: Ach5_31940
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Entry
Ach5_31940 CDS
T03816
Symbol
exsD
Name
(GenBank) radical activating protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf00790
Folate biosynthesis
atf01100
Metabolic pathways
Module
atf_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
Ach5_31940 (exsD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atf03016
]
Ach5_31940 (exsD)
Enzymes [BR:
atf01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
Ach5_31940 (exsD)
Transfer RNA biogenesis [BR:
atf03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Ach5_31940 (exsD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
AKC08967
UniProt:
A0AA86KRF9
LinkDB
All DBs
Position
linear:complement(535478..536233)
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AA seq
251 aa
AA seq
DB search
MTAVAQKVAAKETAIRISEIFGPTIQGEGLLIGLPTVFVRTGGCDYRCSWCDTLHAVDSE
YRDTWKPMSVEAIWQEVRRLSGSVPLTVSLSGGNPAIQPLGQLIAKGQGEGYRFALETQG
SIAKDWFGDLDHLVLSPKPPSSGMETDWRAFEDCLAAAGDGPQVALKIVVFDDADYAYAK
AASARFPHLPIYLQPGNHTPPPPDDDDARVDIDGIMDRMLWLVDKVSEDRWFSARVLPQL
HVLLWGNRRGV
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggttgcacagaaagttgcagcgaaggaaacagcgatccgcatcagcgaaatc
ttcggcccgaccattcagggcgagggtttgctgattggtctgcctaccgttttcgttcgc
actggtggctgcgattaccgctgctcctggtgcgatacgctgcatgccgtcgacagcgag
tatcgcgacacatggaaaccgatgtccgtggaggcgatctggcaggaggtgcgacggctt
tccggcagtgtgccgctgacggtgtcgctttcgggcggcaatcccgccatccagcccctt
gggcaactaatcgcgaaggggcagggcgagggctataggttcgcgctggaaacgcagggc
agcatcgcaaaagactggtttggcgatctcgatcatctggtgctgagcccgaagccacca
tcgagcggcatggaaaccgactggcgggcctttgaagactgtcttgccgccgccggcgat
ggaccgcaggtggcgctgaagatcgtggtgtttgacgatgcggactatgcttatgccaag
gctgcatcagcccgtttcccgcatttgccgatttacctccagcccggcaaccacaccccg
ccgccgccggatgacgacgacgcgcgtgtggatatcgatggaatcatggatcgcatgttg
tggctggtggacaaggtcagcgaagaccgttggttttccgcccgggtgctgccgcagctg
catgtgctcttgtgggggaataggcgaggcgtttga
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