Arabidopsis thaliana (thale cress): AT1G02670
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Entry
AT1G02670 CDS
T00041
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolases superfamily protein
KO
K15083
DNA repair protein RAD16
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT1G02670
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
AT1G02670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
839532
NCBI-ProteinID:
NP_001321903
TAIR:
AT1G02670
UniProt:
A0A1P8ASB2
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Position
1:575922..580532
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AA seq
643 aa
AA seq
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MEPHSHHKNAILPSSSQDENLKEEEVPDDDDSVGGEVQGTASFLLGVIDARFAHTCLFSS
CLAHTGEVNANDYIPNPAAPANTKRKWQIMKEKVQMTEDDDFDEQNAVIAEAAEQPLDLI
IPLLKYQKEFLAWATIQELSAVRGGILADEMGMGKTIQAISLVLARREVDRAKSREAVGH
TLVLVPPVALSQWLDEISRLTSPGSTRVLQYHGPKRDKNVQKLMNYDFVLTTSPIVENEY
RKDEGVDETMSPLHSIKWNRIIVDEAHDIKNRSSRTAKAVFALEATYRWALSGTPLQNDV
DELYSLIRFLRVSPYSYYFCKKCDCEVLDRSAHRKCPSCPHNANQHISWWKENVDKRRNR
ACIFLKQNVLKDILLRRTKLGRAADLALPSRIISLRRDALSVVEADFYESLYKVSKTTFD
GYIQAGTLMNNYAHIFGLLIRLRQAVDHPYLVSYSSPSGANANLLDANKNEKECGFGHDP
SKDYFVTSSEHQASKTKLKGFRASSILNRINLDDFKTSTKIEALREEIRFMVERDWSAKA
IVFSQFTSFLDLISYALGKSGVSCVQLVGSMSKAAKDAALKNFKEEPDCRVLLMSLQAGG
VALNLTAASHVFMMDPWWNPAVERQAQDRIHRIGQCKPVRLYF
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggagccacactctcaccacaagaatgcgattcttccgtctagtagccaagacgagaat
ctcaaagaagaagaagttcctgatgatgatgattcagtcggcggtgaagttcaaggtacc
gcatcgtttctattaggcgtcattgatgctcgatttgctcacacctgtttattttcatca
tgtcttgctcacacaggtgaggtcaatgctaatgactatataccaaatcctgccgctcct
gcaaacactaaaagaaaatggcagatcatgaaagaaaaggttcagatgacagaggatgat
gattttgatgagcagaatgcagtcattgctgaagctgctgagcagcctctagatttgatt
ataccgctactaaagtaccaaaaggagtttttggcttgggctacaatacaggaactatca
gccgtaagaggaggcattctcgctgatgagatgggaatggggaaaacaatacaagccatc
tctctcgttcttgccagacgggaagttgacagagccaaatctagggaagcagttgggcac
acccttgtgcttgttcctcctgttgctctttctcagtggttagatgagatttctcggttg
acatccccgggaagcaccagggttcttcaataccatgggccgaagagagacaagaatgtt
caaaagttaatgaattacgactttgttttgacaacatctcccatagttgagaatgaatat
aggaaggatgaaggagtggacgaaacaatgtctcctttacactctattaagtggaatcgt
atcatcgtcgatgaggctcatgatatcaaaaacagaagtagtcgcactgccaaagctgtt
tttgctttggaggcgacctacagatgggctctgagtggtacccctctccagaatgatgtt
gacgagctctactccctgatacgcttccttcgcgtttcgccatactcatattacttttgc
aagaaatgtgactgtgaagttcttgatcggagtgcgcatcgaaaatgtcccagctgtcct
cataatgcaaatcaacacatctcttggtggaaagagaatgtggacaaacggagaaacaga
gcctgtatattccttaaacaaaatgttctaaaggacattctactaagacgtactaaattg
ggccgggcagctgaccttgctcttccttctagaatcatctctctgaggcgagatgcacta
agtgtagtagaagctgatttctatgaatcactatacaaagttagcaagacaacatttgat
gggtatattcaggctgggacattgatgaataactatgcacatatatttggtcttcttatc
cgactgagacaagctgttgatcatccatacctggtgagttattctagtcctagtggcgct
aacgctaacttgcttgatgcgaacaaaaatgagaaagaatgtggtttcggccatgaccct
tccaaggactactttgtgacttctagtgaacatcaggcaagcaagacaaagcttaaagga
tttagagcctctagcattttaaatcggataaacctcgatgattttaaaacaagtacaaag
attgaggctttgagagaagaaatcaggttcatggttgaaagagattggtctgccaaagca
atagtattcagccagttcacatcattcttggacctgataagttacgccttggggaagtct
ggggttagctgtgttcaactggtgggaagcatgtccaaggcagctaaagatgctgcactc
aaaaattttaaagaagagccagattgcagagttttattaatgagcttgcaagctggaggg
gttgctctaaatctaacagccgcttcgcatgtgttcatgatggacccgtggtggaaccca
gcggttgagaggcaagcacaggacagaatacataggatcggacagtgcaagcctgtcagg
ttatatttttga
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