KEGG   Arabidopsis thaliana (thale cress): AT1G03750
Entry
AT1G03750         CDS       T00041                                 
Symbol
SWI2
Name
(RefSeq) switch 2
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ath03400]
    AT1G03750 (SWI2)
DNA repair and recombination proteins [BR:ath03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    AT1G03750 (SWI2)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 ERCC3_RAD25_C SWI2_SNF2
Other DBs
NCBI-GeneID: 839417
NCBI-ProteinID: NP_171871
TAIR: AT1G03750
UniProt: F4I2H2 A0A178WG64
LinkDB
Position
1:937826..941162
AA seq 862 aa
MSLLHTFKETLKPCGSFPSSSSLRVSSTQELEPSRKPPKSSLSQQLLRLDDSYFLPSKHE
SKISKTQVEDFDHNEDDHKRNIKFDEEEVDEDDERSIEFGRPGLSRAEFDYSGPYEPLML
SSIGEIPIIHVPASINCRLLEHQREGVKFMYNLYKNNHGGILGDDMGLGKTIQTIAFLAA
VYGKDGDAGESCLLESDKGPVLIICPSSIIHNWESEFSRWASFFKVSVYHGSNRDMILEK
LKARGVEVLVTSFDTFRIQGPVLSGINWEIVIADEAHRLKNEKSKLYEACLEIKTKKRIG
LTGTVMQNKISELFNLFEWVAPGSLGTREHFRDFYDEPLKLGQRATAPERFVQIADKRKQ
HLGSLLRKYMLRRTKEETIGHLMMGKEDNVVFCQMSQLQRRVYQRMIQLPEIQCLVNKDN
PCACGSPLKQSECCRRIVPDGTIWSYLHRDNHDGCDSCPFCLVLPCLMKLQQISNHLELI
KPNPKDEPEKQKKDAEFVSTVFGTDIDLLGGISASKSFMDLSDVKHCGKMRALEKLMASW
ISKGDKILLFSYSVRMLDILEKFLIRKGYSFARLDGSTPTNLRQSLVDDFNASPSKQVFL
ISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFRYGQKRHVVVFRLLSAGSLEEL
VYTRQVYKQQLSNIAVAGKMETRYFEGVQDCKEFQGELFGISNLFRDLSDKLFTSDIVEL
HRDSNIDENKKRSLLETGVSEDEKEEEVMCSYKPEMEKPILKDLGIVYAHRNEDIINIGE
TTTSTSQRLNGDGNSADRKKKKRKGCSEEEDMSSSNREQKREKYKMLAEFKGMEILEFSR
WVLSASPFDREKLLQDFLERVK
NT seq 2589 nt   +upstreamnt  +downstreamnt
atgtcgttgttacacactttcaaagagacattgaagccctgtggtagttttccgtcatca
tcatcgttgcgagtttcatccacacaagaattggaaccgtcgagaaaacctcccaaatcg
tcgctctcgcagcagcttctgcgtctcgatgattcttactttttaccctcaaagcacgaa
tctaaaatctcaaaaacccaagtcgaagattttgatcataacgaagatgatcacaaaaga
aacatcaagttcgacgaagaagaagtagatgaagacgatgagagatcaattgaattcggg
agacccgggttaagccgggctgaatttgactattccggtccttatgaaccacttatgctg
tcatcaattggagagattccgatcatacatgtaccggcttctatcaactgtagattgctt
gaacatcagcgagagggagtgaagtttatgtataatctctataaaaacaaccatggtggc
attcttggcgatgacatggggttaggcaagaccattcagacaattgcatttcttgctgca
gtgtatggaaaagacggtgacgctggtgagtcatgtcttttagagtctgataagggtcct
gtactaataatctgtccatcttcgattattcacaactgggagagtgagttttctcgatgg
gcaagcttcttcaaggtttcggtgtaccacggatcaaacagagatatgattctggagaaa
ctcaaggcacgcggtgttgaggtacttgtaaccagctttgatacgtttcgaatccaaggc
cccgttttgtccgggattaattgggagatagtgattgctgatgaggcacaccggttaaag
aatgaaaaatcgaaactttatgaagcatgccttgagatcaagactaagaagaggattggt
ctcacgggtacagtgatgcagaacaagatcagtgagctattcaatctttttgagtgggta
gcaccgggatcactaggcactcgtgaacatttccgagacttctatgatgaaccacttaag
ctagggcagagagctactgctccggaaagatttgtccagattgcagataagaggaaacag
catttgggcagtcttctccgtaagtatatgttgaggaggacaaaggaggaaaccattggg
catctcatgatggggaaagaagataatgtagtcttttgtcaaatgagtcaattgcagaga
cgggtttatcaaagaatgattcaactcccagaaattcagtgccttgtgaataaggacaat
ccatgcgcttgtggaagcccgcttaagcaatcagagtgctgcagaaggattgttcctgat
ggaaccatctggagttaccttcatcgagacaaccacgatggttgtgattcttgtcctttc
tgcttggtgcttccatgccttatgaaacttcagcagataagcaatcatctggagcttatt
aaaccaaacccaaaagatgagccagagaaacagaagaaggacgcagagtttgtatctaca
gtgtttgggacagatattgatctattaggcggaatatctgcaagcaagagcttcatggac
cttagtgatgttaaacattgtgggaaaatgagagctttggagaagttgatggcttcttgg
atttcaaagggtgataagatacttctattcagttactctgtcaggatgctggacatactg
gaaaagtttctaattagaaaaggttatagctttgctagacttgatggttctactccaact
aatctgcgacagtctcttgtggatgatttcaatgcgagtcctagcaaacaggtttttctg
atatcaactaaagctggtgggttgggactaaaccttgtgagcgcgaaccgtgtggttata
tttgacccaaattggaacccgtctcatgacttgcaagcgcaagatagatcatttcggtat
ggacagaaacgtcatgtggtggtttttcgtttgttgagtgctggttcccttgaggaacta
gtttatacaagacaagtatacaaacaacagctctcaaacattgcggttgcagggaaaatg
gagacaaggtactttgaaggcgtccaggactgtaaagagtttcaaggcgagctattcggg
atttcaaatctgttccgtgatctctctgataagctcttcactagcgatattgttgagttg
catagggatagtaacatcgatgagaataagaagagatcactgcttgagacaggtgtttca
gaagatgaaaaagaagaagaggtcatgtgctcttacaaacccgaaatggagaaacctatc
cttaaggacttgggcattgtgtatgcacatcgaaatgaagacatcatcaacattggagag
acaacaacatcaacatctcagaggttaaatggagacggtaacagtgcggatcgaaagaaa
aagaagagaaaaggttgtagtgaagaggaggatatgtcttcttcaaatagggaacaaaaa
cgagagaagtacaagatgttagccgagtttaaaggcatggagatattggagtttagtaga
tgggtattgtcagcgtctccatttgacagagagaagctacttcaagactttttagaaaga
gtcaagtaa

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