Arabidopsis thaliana (thale cress): AT1G05900
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Entry
AT1G05900 CDS
T00041
Symbol
NTH2
Name
(RefSeq) endonuclease III 2
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AT1G05900 (NTH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT1G05900 (NTH2)
Enzymes [BR:
ath01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AT1G05900 (NTH2)
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AT1G05900 (NTH2)
Prokaryotic type
AT1G05900 (NTH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
EndIII_4Fe-2S
HHH_8
MtrA
Motif
Other DBs
NCBI-GeneID:
837100
NCBI-ProteinID:
NP_973767
TAIR:
AT1G05900
UniProt:
B9DFZ0
A0A178W393
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All DBs
Position
1:1786849..1789737
Genome browser
AA seq
386 aa
AA seq
DB search
MILTGAASTFPIVARVLNAMNRRMYAATTLSSAKSISAESLNLRSDSNSEAAHGASESET
RVSLRKKRIKQDDLEPVKKCSARETKARKDMCGLPDIEDSPYKKTNGTASSRTRKLNSYI
KSTEASPSASSIKTAGLGIPPENWEKVLEGIRKMKPSEEAPVNAVECDRTGSFLPPKERR
FYVLIGTLLSSQTKEHITGAAVERLHQNGLLTPEAIDKADESTIKELIYPVGFYTRKATN
VKKVAKICLMEYDGDIPRTLEELLSLPGVGPKIAHLVLHVAWNDVQGICVDTHVHRICNR
LGWVSKPGTKQKTSSPEETRVALQQWLPKGEWVAINFLLVGFGQTICTPLRPHCGTCSIT
EICPSAFKETPSTSSKLKKSIKSKKL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgattctcaccggagccgcttcaacatttcccatcgtcgctcgagttttgaacgctatg
aatcgccgtatgtatgctgctactactctatcatctgccaaatcaatctctgcagaatcc
ctaaatcttcgttccgattccaattcagaggcagcgcatggtgcttctgagtctgagact
cgagtctctttaaggaagaagaggataaagcaggatgatttggagcctgtaaagaaatgt
tccgccagagaaaccaaggcccgcaaggacatgtgtggattacctgatatagaagactct
ccttataagaagactaatggaactgcttcatctaggacgagaaaactaaactcatacata
aaatcaacagaagctagcccttctgcatcgtcgatcaaaacagcagggctaggcatacca
cctgaaaactgggaaaaggtgctcgagggtattcgaaaaatgaaaccttcagaagaagca
ccagttaatgctgtagaatgtgatagaaccggaagctttttacctccaaaggaaaggcga
ttttatgtgctcataggaacacttctttcaagtcagactaaagagcacataactggtgcg
gcagtagaacgacttcatcaaaatggccttctcactcctgaagccattgacaaagccgat
gaatcaaccattaaggaattgatctatccggttggattctatactagaaaggctactaat
gtgaagaaagttgcaaaaatatgtctaatggaatatgacggtgacattccaaggactttg
gaagaactactttcacttccaggagttggtcctaagattgctcatctggttttgcatgta
gcctggaatgatgttcaagggatatgtgtagacacacatgtgcatcgtatttgcaataga
cttggttgggtgtctaaacctggaacgaaacagaaaacctcgtcccctgaggaaactaga
gtagctctgcaacaatggcttccaaaaggagaatgggtggctataaactttctgttggta
ggttttggacaaacgatatgcacaccgctaagaccacactgtggaacttgtagtattact
gagatttgcccttctgccttcaaggagaccccgagcacatcatccaaattgaagaaatct
atcaaaagcaagaagctttag
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