Arabidopsis thaliana (thale cress): AT1G06220
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Entry
AT1G06220 CDS
T00041
Symbol
MEE5
Name
(RefSeq) Ribosomal protein S5/Elongation factor G/III/V family protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT1G06220 (MEE5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT1G06220 (MEE5)
Spliceosome [BR:
ath03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
AT1G06220 (MEE5)
Complex C
U5 SnRNP specific factors
AT1G06220 (MEE5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Septin
EF-G_D2
Ras
Motif
Other DBs
NCBI-GeneID:
837131
NCBI-ProteinID:
NP_001321282
TAIR:
AT1G06220
UniProt:
Q9LNC5
A0A5S9SW58
LinkDB
All DBs
Position
1:1899951..1904897
Genome browser
AA seq
987 aa
AA seq
DB search
MESSLYDEFGNYVGPEIESDRDSDDEVEDEDLQDKHLEENGSDGEQGPGGSNGWITTIND
VEMENQIVLPEDKKYYPTAEEVYGEDVETLVMDEDEQPLEQPIIKPVRDIRFEVGVKDQA
TYVSTQFLIGLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTD
TRVDEQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIV
DAAEGVMVNTERAIRHAIQDHLPIVVVINKVDRLITELKLPPRDAYYKLRHTIEVINNHI
SAASTTAGDLPLIDPAAGNVCFASGTAGWSFTLQSFAKMYAKLHGVAMDVDKFASRLWGD
VYYHSDTRVFKRSPPVGGGERAFVQFILEPLYKIYSQVIGEHKKSVETTLAELGVTLSNS
AYKLNVRPLLRLACSSVFGSASGFTDMLVKHIPSPREAAARKVDHSYTGTKDSPIYESMV
ECDPSGPLMVNVTKLYPKSDTSVFDVFGRVYSGRLQTGQSVRVLGEGYSPEDEEDMTIKE
VTKLWIYQARYRIPVSSAPPGSWVLIEGVDASIMKTATLCNASYDEDVYIFRALQFNTLP
VVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRE
LYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLDRGLAEDIENGVVS
IDWNRKQLGDFFRTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDRNLMMAVKDSI
VQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQMIPTARRVAYSAFLMATPR
LMEPVYYVEIQTPIDCVTAIYTVLSRRRGHVTSDVPQPGTPAYIVKAFLPVIESFGFETD
LRYHTQGQAFCLSVFDHWAIVPGDPLDKAIQLRPLEPAPIQHLAREFMVKTRRRKGMSED
VSGNKFFDEAMMVELAQQTGDLHLQMI
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtagcttgtatgatgagtttggtaactatgttggacctgagattgagtctgac
agagatagtgatgatgaagtagaagatgaagatctccaagataagcatcttgaagaaaat
ggttccgatggcgaacaagggcctgggggttctaatggctggattaccactatcaatgat
gttgagatggagaaccaaattgttcttcctgaggataagaagtactaccctactgctgag
gaggtttatggtgaggatgttgagaccttggttatggatgaagatgagcagcctcttgag
caacccattatcaaacctgttagagatattagatttgaggtgggggtcaaagatcaagca
acgtatgtgtcaacacagtttcttatcggcctcatgtctaatcctgcgcttgtgaggaat
gttgctcttgtggggcatctacagcacggcaaaactgtcttcatggatatgttggtagag
cagacgcatcatatgtctacttttaatgctaaaaacgagaagcatatgaaatatacagac
acacgagtcgatgagcaggagagaaatatatcaatcaaggcggttccaatgtctcttgtc
cttgaggacagtagatccaaatcatacctgtgcaatatcatggatacccctggacatgtc
aatttctctgacgaaatgactgcttctttaagacttgctgatggtgctgttctgattgtt
gatgctgctgaaggagtgatggttaacacagagagagctatacggcatgcaatccaggac
catctccctattgtagttgttatcaataaggttgacaggctcataactgagctcaaacta
cctccaagggatgcttactacaagctgaggcatacaattgaagtcattaataaccacata
tctgctgcttcaacaactgctggagacttacctcttatagaccctgcagctggaaatgta
tgttttgccagtggtacagccggatggtccttcacattacaatcttttgctaaaatgtat
gccaagcttcatggtgtggccatggacgtggataagtttgcatctcgactttggggagat
gtatattatcactctgatactagggtattcaagagaagtcctccagtaggtggtggagaa
agagcatttgttcagtttattctggagcccctatacaagatatacagccaagtgataggt
gaacataagaagagtgtagagaccacccttgcagaattaggagtgactctgagtaatagt
gcatataagctgaacgtcagacctctacttaggttagcctgtagttcagtgtttggttcg
gcatcagggttcactgatatgttggtaaagcacattccttcacccagagaggctgcagct
aggaaggtcgaccattcatataccggaaccaaagattcccccatttatgaatcaatggta
gaatgtgatccatctggacctctcatggttaatgtgacaaagttgtaccccaaatcagat
actagtgtttttgatgtgtttggaagagtttatagtggtaggcttcaaacagggcaaagc
gtacgtgtactaggagaagggtattcacctgaggatgaggaggacatgactataaaagaa
gtgacgaagctatggatatatcaagctaggtatagaataccagtaagcagtgcccctccc
ggttcctgggttttaattgaaggtgtcgatgcatccatcatgaaaactgcgactctgtgt
aatgcaagctatgatgaagatgtctacatattccgggctctccaatttaataccctccca
gtagtcaagactgcaactgagcctttgaatcctagtgagctgcctaaaatggtggaaggg
cttaggaaaattagcaaaagctatccccttgcgattaccaaagttgaggagtctggggaa
catactattctaggcacaggtgagttgtacttggattcaatcatgaaggacctcagggag
ctctattcagaggtcgaagtaaaggttgcagatccggtggtctccttctgtgagacagtg
gttgaatcttcgtcgatgaagtgttttgctgagacaccaaacaaaaagaacaaaataact
atgattgcagagccattggatagaggacttgcagaggacattgagaatggcgttgtaagc
attgactggaacagaaaacaacttggtgacttcttcaggacgaaatatgactgggattta
cttgctgcacgttccatctgggcttttggccctgacaaacaggggccaaacatattattg
gatgacacccttccaactgaggtggacaggaacttgatgatggcagtgaaagactccatt
gttcaagggttccagtggggtgctcgtgaaggtcccctctgtgatgagcccatcagaaat
gtaaagttcaagattgttgatgcacggatagcaccagagccattgcatagaggatctggt
cagatgattccaacagcaagacgtgttgcatattcagcttttctaatggcaactccaagg
ctaatggaacctgtctactatgtggagatacaaacaccaatcgactgtgtaactgcaatc
tacacagttttgtcacgtagacgtgggcatgtcacatctgatgttcctcaacccggtact
ccagcttatatcgtgaaggcctttctgcctgtgatagagtcctttgggtttgagacagat
ctgaggtaccacactcagggacaagccttttgcctatctgtgtttgatcactgggccatt
gtgccaggagaccctctagacaaagccatccagttgcgcccacttgagcccgctcctatt
cagcatctagctcgggaattcatggtcaagacccgccgtagaaagggaatgagcgaagac
gtcagcggaaataaattctttgatgaagcgatgatggtagagcttgcccagcaaacaggc
gatctccatctgcagatgatttga
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