Arabidopsis thaliana (thale cress): AT1G09530
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Entry
AT1G09530 CDS
T00041
Symbol
PIF3
Name
(RefSeq) phytochrome interacting factor 3
KO
K12126
phytochrome-interacting factor 3
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04075
Plant hormone signal transduction
ath04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
AT1G09530 (PIF3)
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
AT1G09530 (PIF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ath03000
]
AT1G09530 (PIF3)
Transcription factors [BR:
ath03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
AT1G09530 (PIF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
837479
NCBI-ProteinID:
NP_001322701
TAIR:
AT1G09530
UniProt:
O80536
A0A5S9TG51
LinkDB
All DBs
Position
1:3075768..3079654
Genome map
AA seq
524 aa
AA seq
DB search
MPLFELFRLTKAKLESAQDRNPSPPVDEVVELVWENGQISTQSQSSRSRNIPPPQANSSR
AREIGNGSKTTMVDEIPMSVPSLMTGLSQDDDFVPWLNHHPSLDGYCSDFLRDVSSPVTV
NEQESDMAVNQTAFPLFQRRKDGNESAPAASSSQYNGFQSHSLYGSDRARDLPSQQTNPD
RFTQTQEPLITSNKPSLVNFSHFLRPATFAKTTNNNLHDTKEKSPQSPPNVFQTRVLGAK
DSEDKVLNESVASATPKDNQKACLISEDSCRKDQESEKAVVCSSVGSGNSLDGPSESPSL
SLKRKHSNIQDIDCHSEDVEEESGDGRKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRIN
EKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYLPPAVMFPPGMGHY
PAAAAAMAMGMGMPYAMGLPDLSRGGSSVNHGPQFQVSGMQQQPVAMGIPRVSGGGIFAG
SSTIGNGSTRDLSGSKDQTTTNNNSNLKPIKRKQGSSDQFCGSS
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgtttgagcttttcaggctcaccaaagctaagcttgaatctgctcaagacagg
aacccttctccacctgtagatgaagttgtggagctggtgtgggaaaatggtcagatatca
actcaaagtcagtcaagtagatcgaggaacattcctccaccacaagcaaactcttctaga
gctagagagattggaaatggctcaaagacgactatggtggacgagatccctatgtcagtg
ccatcactaatgacgggtttgagtcaagacgatgactttgttccatggttgaatcatcat
ccctcccttgatggatattgctctgatttcttgcgtgatgtgtcgtctcctgttactgtc
aacgagcaagagagtgatatggcggtaaaccaaactgctttcccgttgtttcagagaaga
aaggatggcaatgaatcagctcctgctgcttcttcgtcgcagtataacggtttccaatcg
cattctctgtatggaagtgatagagctagagatcttcctagccaacaaaccaatccggat
cggtttactcagacgcaggaaccactaattactagtaacaagcctagtttggtcaacttt
tcacatttcttacgccctgcaacttttgcgaagactactaataataaccttcatgacact
aaagaaaagagtcctcaaagcccgccaaatgtgtttcagaccagagttcttggagctaaa
gactctgaagataaggttcttaacgagtctgttgcttctgctacgcctaaagataaccaa
aaggcttgcctaatatcagaggactcatgtagaaaagaccaagagagtgaaaaagcagtt
gtatgttcttctgttggctcgggtaatagtctcgatggcccatccgaaagtccttcactt
tctttaaagagaaagcattcgaatattcaagacattgactgtcatagtgaagatgtggaa
gaagaatcaggagatggaagaaaggaagcaggtccatctcgaacgggtttgggttcaaag
agaagccgctctgcagaagtgcataatctgtctgaaaggagacggcgtgataggatcaac
gagaagatgcgtgccctgcaagaactcattccaaactgtaacaaggtggacaaagcttcg
atgctagatgaagccatcgagtatctcaagtcactccaacttcaagtgcagatcatgtca
atggcgtctggttactatctgccaccggcggttatgttcccaccgggtatggggcattac
ccggcagcagctgctgcaatggcaatgggtatgggaatgccttatgcaatgggcttgcct
gatttgagccgtggtggttcatcggttaaccacggaccacagttccaagtctcggggatg
caacaacaaccagtggcgatgggtattccacgtgtctctggtggtggtatctttgccggt
tcttcgacgattggcaatggctcgactagagatttatctggttctaaagatcaaacaacg
acgaataacaacagtaacttgaaaccaataaagagaaaacaggggtcttctgatcagttt
tgtggatcgtcgtga
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