Arabidopsis thaliana (thale cress): AT3G42830
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Entry
AT3G42830 CDS
T00041
Name
(RefSeq) RING/U-box superfamily protein
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03420
Nucleotide excision repair
ath04120
Ubiquitin mediated proteolysis
ath04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
AT3G42830
04120 Ubiquitin mediated proteolysis
AT3G42830
09124 Replication and repair
03420 Nucleotide excision repair
AT3G42830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT3G42830
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT3G42830
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
AT3G42830
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
AT3G42830
Multi subunit type E3
SCF complex
Ring finger protein
AT3G42830
Cul2 complex
AT3G42830
Cul3 complex
AT3G42830
Cul4 complex
AT3G42830
Cul7 complex
AT3G42830
Cul8 complex
AT3G42830
Cul9 complex
AT3G42830
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
AT3G42830
TCR (transcription coupled repair) factors
Cul4-CSA complex
AT3G42830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-Nse
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
823327
NCBI-ProteinID:
NP_189869
TAIR:
AT3G42830
UniProt:
Q9M2B0
A0A5S9XIZ6
LinkDB
All DBs
Position
3:complement(14929714..14930678)
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AA seq
115 aa
AA seq
DB search
MASLNSDVIMGESSSISVPSSSSKNSKRFELKKWSAVALWAWDIVVDNCAICRNHIMDLC
IECLANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDVCEWEFQKYGH
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atggcttctctcaactccgacgttatcatgggtgaatcctcctccatctccgtaccttca
tcttcgtccaagaactcgaaacgatttgaattaaagaagtggagtgctgtcgctctctgg
gcttgggatatcgttgttgataactgcgcaatttgtaggaatcacatcatggatctctgt
attgaatgtctagctaatcaagctagtgccactagtgaggaatgcactgttgcttggggg
gtttgcaaccacgcctttcacttccactgtatcagcagatggctcaaaactcgtcaagtg
tgtccactagatgtctgcgagtgggaattccagaaatatggtcactaa
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integrated database retrieval system