KEGG   Arabidopsis thaliana (thale cress): AT3G42830
Entry
AT3G42830         CDS       T00041                                 
Name
(RefSeq) RING/U-box superfamily protein
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03420  Nucleotide excision repair
ath04120  Ubiquitin mediated proteolysis
ath04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    AT3G42830
   04120 Ubiquitin mediated proteolysis
    AT3G42830
  09124 Replication and repair
   03420 Nucleotide excision repair
    AT3G42830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT3G42830
   03400 DNA repair and recombination proteins [BR:ath03400]
    AT3G42830
Enzymes [BR:ath01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     AT3G42830
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   AT3G42830
  Multi subunit Ring-finger type E3
   SCF complex
    Ring finger protein
     AT3G42830
   Cul2 complex
     AT3G42830
   Cul3 complex
     AT3G42830
   Cul4 complex
     AT3G42830
   Cul7 complex
     AT3G42830
   Cul8 complex
     AT3G42830
   Cul9 complex
     AT3G42830
DNA repair and recombination proteins [BR:ath03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      AT3G42830
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      AT3G42830
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-Nse zf-RING_16
Other DBs
NCBI-GeneID: 823327
NCBI-ProteinID: NP_189869
TAIR: AT3G42830
UniProt: Q9M2B0 A0A5S9XIZ6
LinkDB
Position
3:complement(14929714..14930678)
AA seq 115 aa
MASLNSDVIMGESSSISVPSSSSKNSKRFELKKWSAVALWAWDIVVDNCAICRNHIMDLC
IECLANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDVCEWEFQKYGH
NT seq 348 nt   +upstreamnt  +downstreamnt
atggcttctctcaactccgacgttatcatgggtgaatcctcctccatctccgtaccttca
tcttcgtccaagaactcgaaacgatttgaattaaagaagtggagtgctgtcgctctctgg
gcttgggatatcgttgttgataactgcgcaatttgtaggaatcacatcatggatctctgt
attgaatgtctagctaatcaagctagtgccactagtgaggaatgcactgttgcttggggg
gtttgcaaccacgcctttcacttccactgtatcagcagatggctcaaaactcgtcaagtg
tgtccactagatgtctgcgagtgggaattccagaaatatggtcactaa

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