KEGG   Arabidopsis thaliana (thale cress): AT3G47830
Entry
AT3G47830         CDS       T00041                                 
Name
(RefSeq) DNA glycosylase superfamily protein
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AT3G47830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ath03400]
    AT3G47830
Enzymes [BR:ath01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     AT3G47830
DNA repair and recombination proteins [BR:ath03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     AT3G47830
 Prokaryotic type
     AT3G47830
SSDB
Motif
Pfam: HhH-GPD USP47_C
Other DBs
NCBI-GeneID: 823937
NCBI-ProteinID: NP_566893
TAIR: AT3G47830
UniProt: F4JCQ3 A0A178VLP3
LinkDB
Position
3:17647004..17648431
AA seq 293 aa
MSKAQKRKRLNKYDGESKTPANKSTVDGGNPYPTLLRPTAEECRDVRDALLSLHGFPPEF
ANYRRQRLRSFSAVDDHDTQCNLKSETLNETEEESVLDGLVKILLSQNTTESNSQRAFAS
LKATFPKWDDVLNAESKSIENAIRCGGLAPKKAVCIKNILNRLQNERGRLCLEYLRGLSV
EEVKTELSHFKGVGPKTVSCVLMFNLQHNDFPVDTHVFEIAKALGWVPKTADRNKTYVHL
NRKIPDELKFDLNCLLYTHGKICSNCKKNVAKPKAKVASPDDCPLVGFYDLIV
NT seq 882 nt   +upstreamnt  +downstreamnt
atgagtaaagcccaaaaacggaaacgcctaaacaaatacgacggcgaatcaaaaactccg
gccaataaatcaaccgtcgacggcggcaatccttaccctacactacttagacctaccgct
gaagaatgccgagacgtaagggatgctttgttgtctctccatggattccctcccgaattc
gctaattaccgccgtcaaagactccgatcattctccgccgtcgatgatcacgatacacag
tgtaatctgaaatctgagacattgaatgaaacggaagaggagagtgtacttgatgggctt
gttaagattcttctctcgcagaatacaactgagagcaattcccaaagggcttttgcttct
cttaaagctacatttccgaaatgggatgacgttttgaatgctgagtctaaatcaattgag
aatgctataagatgtggaggattggcaccgaaaaaggcggtgtgtatcaagaacatattg
aaccgtttgcagaacgaaagaggtagattgtgcttggagtatctgcgaggtttatcggtc
gaagaagtaaaaaccgagctctctcattttaaaggagtaggacctaaaacggtttcttgt
gttctgatgttcaatctccagcacaatgatttcccagtagacactcatgtgtttgagatc
gcaaaggcgttaggttgggttccgaaaaccgcagacaggaacaaaacgtatgttcatctc
aaccgcaagatccctgatgagctcaagtttgatctgaactgtctgttatatacacatggt
aagatctgcagcaattgcaagaagaatgttgctaaaccaaaagctaaagtggcatctcct
gatgattgccctcttgttggtttttatgatttaatagtttag

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