Arabidopsis thaliana (thale cress): AT4G20440
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Entry
AT4G20440 CDS
T00041
Symbol
smB
Name
(RefSeq) small nuclear ribonucleoprotein associated protein B
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT4G20440 (smB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT4G20440 (smB)
03041 Spliceosome [BR:
ath03041
]
AT4G20440 (smB)
03032 DNA replication proteins [BR:
ath03032
]
AT4G20440 (smB)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
AT4G20440 (smB)
Spliceosome [BR:
ath03041
]
Complex A
U1 snRNP components
Sm proteins
AT4G20440 (smB)
U2 snRNP components
AT4G20440 (smB)
Complex B
U1 snRNP components
AT4G20440 (smB)
U4/U6.U5 tri-snRNP components
AT4G20440 (smB)
Complex C
U2 snRNP components
AT4G20440 (smB)
DNA replication proteins [BR:
ath03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
AT4G20440 (smB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
827792
NCBI-ProteinID:
NP_001329619
TAIR:
AT4G20440
UniProt:
Q9SUN5
A0A384KCA8
LinkDB
All DBs
Position
4:complement(11022036..11023851)
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AA seq
257 aa
AA seq
DB search
MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKIN
EEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAGSAAAVAGPGIGRAAGRGVPTGP
LVQAQPGLSGPVRGVGGPAPGMMQPQISRPPQLSAPPIIRPPGQMLPPPPFGGQGPPMGR
GPPPPYGMRPPPQQFSGPPPPQYGQRPMIPPPGGMMRGPPPPPHGMQGPPPPRPGMPPAP
GGFAPPRPGMPPHNQQQ
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgaagagttcaaagatgcttcagttcatcaactacaggatgcgagtgacg
atccaagacggaagacagctcgttgggaagttcatggcgtttgaccgtcacatgaacctc
gttctcggcgattgcgaggagtttcgtaagcttccaccagctaaagggaagaagatcaac
gaagagcgtgaagatcgccgtacgctaggtttagtgttgcttagaggtgaagaagttatc
tcaatgactgtcgaaggaccacctcctcctgaagaatctcgtgctaaagctggctctgca
gctgctgttgctggtccaggaattggccgtgccgctgggcgtggagttcctactggtccg
ttagttcaagctcagcctggtttatctggtcctgttcgtggtgttggtggacctgctccg
ggaatgatgcagcctcagatctctcgtccaccacagctttcagctcctccgattattcga
cctccgggacagatgttgccaccgcctccttttggtggtcaaggtcctcctatgggaaga
ggtcctccaccgccttatggtatgaggccaccgccacagcagttttctggaccaccaccg
cctcagtatgggcaaaggccaatgattcctcctcctggtggtatgatgagaggacctcct
cctccacctcatggaatgcaaggacctcctccgcctcgccctggaatgcctcctgctcct
ggtggttttgctccaccgcgtcctggcatgccaccacataatcagcagcagtga
DBGET
integrated database retrieval system
