Arabidopsis thaliana (thale cress): AT4G28790
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Entry
AT4G28790 CDS
T00041
Name
(RefSeq) basic helix-loop-helix (bHLH) DNA-binding superfamily protein
KO
K16189
phytochrome-interacting factor
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
AT4G28790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ath03000
]
AT4G28790
Transcription factors [BR:
ath03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
AT4G28790
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_LHW
Pepco
Motif
Other DBs
NCBI-GeneID:
829000
NCBI-ProteinID:
NP_001320083
TAIR:
AT4G28790
UniProt:
Q9SVU6
C0SVK2
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All DBs
Position
4:14218214..14220998
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AA seq
413 aa
AA seq
DB search
MTWKPKMLILSHDLISPEKYIMGEDDIVELLGKSSQVVTSSQTQTPSCDPPLILRGSGSG
DGEGNGPLPQPPPPLYHQQSLFIQEDEMASWLHQPNRQDYLYSQLLYSGVASTHPQSLAS
LEPPPPPRAQYILAADRPTGHILAERRAENFMNISRQRGNIFLGGVEAVPSNSTLLSSAT
ESIPATHGTESRATVTGGVSRTFAVPGLGPRGKAVAIETAGTQSWGLCKAETEPVQRQPA
TETDITDERKRKTREETNVENQGTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKAL
QELLPRCTKTDRSSMLDDVIEYVKSLQSQIQMFSMGHVMIPPMMYAGNIQQQYMPHMAMG
MNRPPAFIPFPRQAHMAEGVGPVDLFRENEETEQETMSLLLREDKRTKQKMFS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgacttggaaaccgaagatgcttatattatcccatgatctaatctcaccagaaaaatac
atcatgggtgaagatgatatcgtggagctcttagggaagagcagccaagtagttacaagt
agccagacacaaacaccctcttgcgatcctcctctcattctccggggcagcggaagcggg
gacggagaaggaaatggtcctctaccgcagcctccgcctcccctgtaccatcagcagagt
ctctttatccaagaagacgaaatggcttcttggcttcaccagcctaatcgccaagattat
ctctactcccaacttctttactccggagtagcctcgactcacccgcaaagtttggcctcc
ctagaaccaccaccaccacctagggctcagtacattctggcggcggatagaccgaccggt
catattttggccgagagaagggcggagaattttatgaatatctcgaggcaaagagggaac
atatttcttggcggtgttgaagctgtaccgtcgaactcgaccctgttgtcttcagccact
gaatcaataccagcgactcacggcaccgagagtcgagcaacagtcactggcggagtatct
cgtacttttgcagttcctggtcttggtccgaggggaaaggcggtggcgattgagacggcg
ggaacacaatcttgggggttgtgcaaggccgaaacagagccggttcagagacaaccagcg
acggagacggatatcaccgatgaacggaagagaaaaacgagagaggaaacaaatgtcgaa
aaccagggaactgaagaagctcgtgattcgacgtctagtaagaggtcacgagctgcaata
atgcataaactctccgaaaggagacggagacaaaagattaacgagatgatgaaggctttg
caagaactccttcctcgctgcacaaagactgatagatcttccatgctggatgatgttata
gagtacgtgaaatctctacagagccaaatacagatgttctcaatgggacatgttatgatt
ccaccgatgatgtatgcggggaatatacaacaacagtacatgccccacatggccatgggt
atgaatcggcctcctgcattcatacctttccctaggcaggctcatatggcggaaggtgta
ggtcctgttgatttatttagagagaatgaagaaacagagcaagagacaatgtctcttctc
cttagagaagacaaaagaacaaaacagaaaatgttttcttga
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