Arabidopsis thaliana (thale cress): AT4G28800
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Entry
AT4G28800 CDS
T00041
Name
(RefSeq) basic helix-loop-helix (bHLH) DNA-binding superfamily protein
KO
K16189
phytochrome-interacting factor
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
AT4G28800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ath03000
]
AT4G28800
Transcription factors [BR:
ath03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
AT4G28800
BRITE hierarchy
SSDB
Ortholog
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
CENPU
NAGidase
Motif
Other DBs
NCBI-GeneID:
829001
NCBI-ProteinID:
NP_001320084
TAIR:
AT4G28800
UniProt:
A0A2H1ZEQ1
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All DBs
Position
4:14221632..14224116
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AA seq
451 aa
AA seq
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MQFDESDARVWIWFEIRREDDIVELLWQSGQVVGTNQTHRQSYDPPPILRGSGSGRGEEN
APLSQPPPHLHQQNLFIQEGEMYSWLHHSYRQNYFCSELLNSTPATHPQSSISLAPRQTI
ATRRAENFMNFSWLRGNIFTGGRVDEAGPSFSVVRESMQVGSNTTPPSSSATESCVIPAT
EGTASRVSGTLAAHDLGRKGKAVAVEAAGTPSSGVCKAETEPVQIQPATESKLKAREETH
GTEEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEY
VKSLQSQIQMMSTGQGMMSPMMNAGNTQQFMPHMAMDMNRPPPFIPFPGTSFPMPAQMAG
VGPSYPAPRYPFPNIQTFDPSRVRLPSPQPNPVSNQPQFPAYMNPYSQFAGPHQLQQPPP
PPFQGQTTSQLSSGQASSSKEPEDQENQPTA
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttgatgagtctgatgctagggtttggatttggtttgaaattaggcgtgaagat
gatatagtggagcttttatggcaaagcggccaagtagttggaaccaaccaaacacataga
caatcctacgatcctcctcccattctccgcggcagcggaagtggcagaggagaagaaaat
gctcccctttcacaacctccgcctcacctgcatcagcaaaatctcttcattcaagaaggc
gaaatgtattcgtggctacaccattcttaccgccaaaactatttctgctcagaacttctc
aactccactccggctactcacccgcaaagttccatctctctggcaccacgtcagactatc
gccacgagaagggcggaaaactttatgaacttctcgtggctaagagggaacatatttacc
ggcggtagagttgatgaagctggaccgtcgttttcggtggtaagagaatcgatgcaggta
ggctcgaacacgacccccccttcttcttctgccactgaatcatgtgtaataccagctaca
gagggcaccgcgagtcgagtgtcgggaactttggcagctcatgatcttggtcggaaggga
aaggcggtggcggttgaggcggccggaacaccatcttcaggagtgtgcaaggccgaaaca
gagccggttcagatacaaccagcaacggagtcgaagctaaaagcgagagaagaaacccat
ggaactgaagaagctcgtggttcaacgtctagaaagagatcacgaactgcagaaatgcat
aacctcgccgaaaggagaaggagagaaaagatcaacgagaagatgaagactctgcaacaa
ctcattcctcgctgcaacaagtctactaaagtttcaacgctggatgatgctatcgagtac
gtcaaatcgttacagagccaaatacaaatgatgtcgacgggacagggtatgatgtcgcca
atgatgaatgccgggaatacgcaacagttcatgccccatatggccatggatatgaaccga
cctcctccattcatacctttccccggcacatcttttcctatgccggctcaaatggcaggt
gtaggtccatcatatccagcaccgcgctacccttttcccaacattcagacctttgaccca
tccagagtccgtttaccaagcccgcagcctaacccggtgtcgaaccagcctcagtttccg
gcttacatgaatccctatagccagtttgctggtccccaccagttgcaacaacctcctcct
cctccatttcagggtcaaacaacatcacaactgagttccgggcaggcaagtagtagcaag
gaacctgaggatcaggagaaccaaccaacagcttag
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