Arabidopsis thaliana (thale cress): AT4G28811
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Entry
AT4G28811 CDS
T00041
Name
(RefSeq) basic helix-loop-helix (bHLH) DNA-binding superfamily protein
KO
K16189
phytochrome-interacting factor
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
AT4G28811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ath03000
]
AT4G28811
Transcription factors [BR:
ath03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
AT4G28811
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
5008170
NCBI-ProteinID:
NP_001078462
TAIR:
AT4G28811
UniProt:
Q8GT73
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All DBs
Position
4:14225208..14228071
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AA seq
544 aa
AA seq
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MGEDDIVELLWNGQVVRTSQPQRPSSGKPSPTPPILRGSGSGSGEENAPLPLPLLQPPRP
LHHQNLFIREEEMSSWLHYSYTGVTSTPATHPQSSVSLPPPPPIAPSEDDVVELLWKSGQ
VVQSIQTQRPIPPPIFRGSGSGGGEETVLPLPPLHPSHQNIFIQEDEMASWLYHPLRQDY
FSSGVASTSATRPQSSASLAPTPPPPSVPYGQIPVERRTENFMNFLRLRGNIFSGGRVEA
GPVVIESTQIGSSATPSSSAAESCVIPATHGTESRAAAITGVSRTFAVPGLGRRGKEVAT
ETAGTSYSGVNKAETERVQIQPERETKITEDKKREETIAEIQGTEEAHGSTSRKRSRAAD
MHNLSERRRRERINERMKTLQELLPRCRKTDKVSMLEDVIEYVKSLQLQIQMMSMGHGMM
PPMMHEGNTQQFMPHMAMGMKGMNRPPPFVPFPGKTFPRPGHMAGVGPSYPALRYPFPDT
QASDLSRVHVPSLHSNPVPNQPRFPAYINPYSQFVGLHQMQQPPLPLQGQPTSQPSFSHA
STSK
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaagatgatatagtggagctcttatggaacggccaagtcgttcgaaccagccaa
ccacaaagaccttcctcgggtaaaccttctcctactccacccattctgcgtggtagcgga
agcggcagcggagaagaaaatgctccccttccacttccacttctacaacctccacgtccc
ctgcatcatcagaatctcttcattcgggaagaagaaatgtcttcttggcttcactattct
tacactggtgtcacgtccacaccggctactcatccgcaaagttctgtttccctgccacca
ccaccacccattgctccgagtgaagatgatgtggtggaactcttatggaaaagcggccaa
gtcgttcaaagcatccagacacagagacccattcctcctcccattttccgcggcagcgga
agtgggggaggtgaagaaactgttctgcctctgcctcccctgcatccgtctcatcaaaat
atcttcatccaggaagacgaaatggcctcttggctttaccatcccctccgtcaagattat
ttttcctctggcgtcgcctctacttcagctactcgcccgcaaagttccgcctctctagca
ccaacaccaccaccacccagtgttccctacggtcagattcccgttgagagaaggacagag
aattttatgaacttcttgaggctaagagggaacatattttccggcggtagagttgaagct
ggtccggtggttatagaatcgacgcagataggctcaagcgcgaccccgtcgtcttcagcc
gctgaatcctgtgtaataccagcgactcacggcaccgagagtagagcggcggccattacc
ggagtatcccgtacttttgcagttcctggtcttggtcggaggggaaaggaggtggcaacc
gagacggccggaacatcatattcaggggtaaacaaggccgaaacagagcgggttcaaata
caaccggagagggagacgaaaattaccgaagataagaagagagaagaaaccattgcagaa
atccaaggaactgaagaagctcatggttcaacgtctaggaagaggtcacgagctgcagat
atgcataacctctccgaaaggagacggagggaaaggatcaacgagaggatgaaaactctg
caagaactccttcctcgctgcagaaagactgataaagtttcaatgcttgaagatgttatc
gagtacgtgaaatcgctacagctgcaaatacagatgatgtcgatgggacatggtatgatg
ccaccgatgatgcatgaggggaatacgcaacagttcatgccccacatggccatggggatg
aagggtatgaaccggcctcctcctttcgtaccgttccccggcaaaacttttcctaggccg
ggtcatatggcaggtgtaggtccatcatacccagcattgcgctacccttttccagacaca
caagcctctgacctatccagagtccatgtaccaagtctgcactctaacccggtgccaaac
cagcctcggtttccggcttacataaatccctatagccagtttgttggtctccaccagatg
caacaacctcctcttccattgcagggtcaaccaacatcacagcctagtttcagccacgca
agtactagcaagtaa
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integrated database retrieval system
