Arabidopsis thaliana (thale cress): AT5G20570
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Entry
AT5G20570 CDS
T00041
Symbol
RBX1
Name
(RefSeq) RING-box 1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03420
Nucleotide excision repair
ath04120
Ubiquitin mediated proteolysis
ath04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
AT5G20570 (RBX1)
04120 Ubiquitin mediated proteolysis
AT5G20570 (RBX1)
09124 Replication and repair
03420 Nucleotide excision repair
AT5G20570 (RBX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT5G20570 (RBX1)
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT5G20570 (RBX1)
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
AT5G20570 (RBX1)
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
AT5G20570 (RBX1)
Multi subunit type E3
SCF complex
Ring finger protein
AT5G20570 (RBX1)
Cul2 complex
AT5G20570 (RBX1)
Cul3 complex
AT5G20570 (RBX1)
Cul4 complex
AT5G20570 (RBX1)
Cul7 complex
AT5G20570 (RBX1)
Cul8 complex
AT5G20570 (RBX1)
Cul9 complex
AT5G20570 (RBX1)
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
AT5G20570 (RBX1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
AT5G20570 (RBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
832179
NCBI-ProteinID:
NP_568396
TAIR:
AT5G20570
UniProt:
Q940X7
A0A178UAL4
LinkDB
All DBs
Position
5:complement(6956573..6958338)
Genome browser
AA seq
118 aa
AA seq
DB search
MATLDSDVTMIPAGEASSSVAASSSNKKAKRFEIKKWSAVALWAWDIVVDNCAICRNHIM
DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atggcgactctagactccgacgttaccatgattcctgccggagaagcctccagcagcgta
gccgcgtcgtcttccaacaagaaagctaagcgattcgaaattaagaagtggagcgccgtt
gctctctgggcttgggatatcgttgttgacaactgtgcgatctgcagaaaccacatcatg
gatctttgtatcgagtgtcaggctaatcaggccagtgccacaagtgaagagtgcactgta
gcttggggggtttgcaatcacgccttccactttcactgcatcagcagatggctaaagact
cgtcaagtttgtccattggataacagtgagtgggagtttcagaaatatggtcactaa
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