KEGG   Arabidopsis thaliana (thale cress): AT5G25560
Entry
AT5G25560         CDS       T00041                                 
Name
(RefSeq) CHY-type/CTCHY-type/RING-type Zinc finger protein
  KO
K10144  RING finger and CHY zinc finger domain-containing protein 1 [EC:2.3.2.27]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    AT5G25560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT5G25560
Enzymes [BR:ath01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     AT5G25560
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    AT5G25560
SSDB
Motif
Pfam: zinc_ribbon_6 zf-CHY zf-RING_2 zf-RING_5 zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-RING_4
Other DBs
NCBI-GeneID: 832631
NCBI-ProteinID: NP_001190397
TAIR: AT5G25560
UniProt: F4JY61
LinkDB
Position
5:8897797..8901740
AA seq 303 aa
MGDVYFNHFAQQLQMSDQEKGEMSRHSHPHSINEESESSTLERVAAESLTNKVLDRGLME
YGRRCCIRAPCCNEIFGCHHCHYEAKNNINVDQKQRHDIPRHQVEQVICLLCGTEQEVGQ
ICIHCGVCMGKYFCKVCKLYDDDTSKKQYHCDGCGICRIGGRENFFHCYKCGCCYSILLK
NGHPCVEGAMHHDCPICFEFLFESRNDVTVLPCGHTIHQKCLEEMRDHYQYACPLCSKSV
CDMSKVWEKFDMEIAATPMPEPYQNRMVQILCNDCGKKAEVQYHVVAQKCPNCKSYNTRQ
TRG
NT seq 912 nt   +upstreamnt  +downstreamnt
atgggagacgtatatttcaaccatttcgctcagcaactgcagatgtctgaccaagagaag
ggtgaaatgtcaagacattcacaccctcattcaatcaatgaagaatctgagtcgtcaact
ctggaaagggtagcagcagagtcattaacaaacaaagtccttgatagaggactaatggag
tatggaagaaggtgttgcattagagctccttgctgtaatgagatctttggttgccatcac
tgtcattatgaggcgaagaacaacataaatgtagatcagaagcagaggcatgatattcct
cgccaccaagttgaacaggttatttgtttactttgtggtactgaacaagaggtgggccaa
atttgtatccactgtggagtgtgcatggggaagtacttctgtaaagtctgcaagctctac
gatgatgatacgtctaaaaaacagtaccactgcgatgggtgtggaatttgcagaatcgga
ggacgtgaaaatttctttcactgttacaagtgtggctgttgttattcaatcctcctcaag
aacggtcacccttgtgtcgaaggagcaatgcatcacgactgccccatttgctttgagttt
ctgtttgaatcacggaacgatgtgacggttttaccatgtggacacacaattcatcagaag
tgcttggaggaaatgagagatcattaccaatatgcgtgcccactttgctcaaaatctgta
tgcgacatgtcaaaagtgtgggagaagtttgacatggagattgcggctacaccaatgcca
gaaccataccagaacagaatggttcagattctctgcaacgactgtgggaagaaagcagag
gtacagtaccatgtggtggctcagaaatgcccaaactgcaaatcatacaacactcgccaa
accagaggctga

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