Arabidopsis thaliana (thale cress): AT5G40480 Help Entry AT5G40480         CDS       T00041                                  Symbol EMB3012 Name (RefSeq) embryo defective 3012   KO K14314   nuclear pore complex protein Nup210 Organism ath  Arabidopsis thaliana (thale cress) Pathway ath03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:ath00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     AT5G40480 (EMB3012)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ath03019]     AT5G40480 (EMB3012) Messenger RNA biogenesis [BR:ath03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      AT5G40480 (EMB3012) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Ig_GP210_15th Ig_GP210_16th Ig_NUP210_1st Ig_NUP210_7th Big_2 Ig_NUP210_2nd Ig_NUP210_3rd Ig_NUP210_15th Ig_NUP210_9th Motif Other DBs NCBI-GeneID:  834046 NCBI-ProteinID:  NP_198864 TAIR:  AT5G40480 UniProt:  F4KHD8 LinkDB All DBs Position 5:16213036..16224177 Genome browser AA seq 1923 aa AA seqDB search MVPVSFCFFFLLLLLSAGESSSQLVSGPHITDVNILLPPKMKNPVEYRLQGSDGCFKWSW DHHDILSVTPEFNSSSHCSTSARLRSISPYSGRKETAVYATDIQTGMVIRCKVFIDNFSR IQIFHNSIKLDLDGLSMLRVRAFDNEDNEFSSLVGLQFIWKLMPESGGSTHHLAHVPLKE SPLTDCGGLCGYLDIQKKLEDSGVFADLFVVKGTKIGHEKVSVHLLEAPLTHIADEIVLT VAEAMSLEPRSPVYVLMGASFGYTLKVMRGNVPQAVDLPSPHHRWSVLNSSVAQVDSLIG LTKALSLGVTTVVVEDTRVAGHIQGSSINVVTPDTLILYISPWSMSGDLITESKPFPSSM HWYVVSGRQYLIQMKIFSGRPDAHEIYITETDDIKLYGKDSDYWKIVSLPDELSSEYGQR NSRILNAISPGLGELTSTLTYFSGHQESKEVLKVVQEIRVCEKVQFTLNSEDDTPKVLLP WTPAVYQEMELIVTGGCAKASSDYKWFTSDISILSVSAYGIIQAKRPGIATVKVVSTFDS QNFDEVIVEVSIPSSMVMLQNFPVETVVGSHLKAAVTMKALNGATFSRCDAFNSLIKWKT GSESFVIVNATSEMMMLDELRSMDSSPPCSRASIYTASTGRTVLQATLAKEFHYFDKSLS ESIDLKATLTIGAYLPLSVRQDSDGNHHGGYWFDKAQEETDFGVSKLYLVPGTYVDVMLL GGPERWDDNVEFTETVKTLYEDEEDLTSRVNVHHEVDRRANMYRISCQKLGSYKLVFLRG NLLGIDHPVPAVAEALLSVHCSLPSSVVLIVDEPVNKLDVIRAASQADRAPGRLRVTPVT VANGQIIRVAAVGISEFGEAFSNSSTLSLRWELTSCNNLAYWDDDYNSKMTKSGWERFLA LRNESGLCTVRATVSGIDYSFKSQYSTLLPQGSESTLTDAVRLQLVSTLRVTPEFNLVFF NPNAKVNLSMTGGSCLWEAVVNNSRVAEVIRPPSGLQCSQMMLSPKGLGTTIVTVYDIGV SPPLSALALIKVADVDWIKIASGDEISIMEGSTHSIDLLTGIDDGMTFDSSQYSLMDIMV HIEDDLVEHVTVDEDSLSVGEHVATSSFKIAARRLGITTLYVSARQQSGGKVLSQTIKVE VYSPPRLHPQGIFLVPGASYVLTIEGGPTMNVSVDYTTVDNEVAKIEKSGRLYATSPGNT TIYATIYGSEGAVICQAIGNAEVGLPATAMLVAQSDTVAVGHEMPVSPSFPEGDLLSFYE LCSAYKWTIEDEKVLIFIASSINVEENAGFVNVVQGRSAGKTRVTIAFSCDFVSPGLYSE SRTYEASMILSVVPDLPLSLGAPMTWVLPPFYTSSGLLPSSSEPQKHRDGQSHRGNIVYS ILKDCSSRADFERDTISINGGSVKTTDSNNVACIQAKDRTSGRIEIAACVRVAEVAQIRM KSEGIPFHVIDLAVGGELELPINYYDTLGIPFLEAHGVTTYNVETNHRDVVFIKTVNDQP SAYIKGIKHGKALIRVSIGDNLRKSDYVLVSVGAHIFPQNPVIHTGNLLNFSITGADNEV TGQWFTSNRSVISVNVASGQAKAISQGSTHVTFKGHGLKLQTKVTVLFGNTIYVDSPGET LTNVHVPAEGYKFPVKFRENKFAVTEHGNKATFNCQVDPPFIGYTKPWMDLDTGNTYCLF FPYSPEHLVHSMSITKDMKPHVSFSVDASLKEARRVSGSASALLIGGFSVTGPDKLNINP DSNTTIISLVGNTDVQIHCRNKGRLSISLIKRDDFGIAGHAQYKVNVLRSEQFTDRIIIT LPATGQIVEIDVCYDTGESLVASSKDGYSVLLKILWGVLVLVVSVIILMKVIDRQVPTGA TGTATYSGNAAQGTPERRSGTVIYHEESPRTPSPFMEYVKRTVDETPYYRREGRRRFNPQ NTM NT seq 5772 nt NT seq  +upstreamnt  +downstreamnt atggttcccgtctcgttctgcttcttctttctccttctcttgctctctgctggagagagt tcatcgcaattagtttctggtccacacatcaccgatgttaacatactcttacctcccaag atgaagaatccggttgagtatcgccttcaaggaagtgatggctgcttcaaatggtcatgg gatcatcatgatattctatcagtcacacctgagtttaattcgagcagtcattgttcgacc agcgcgcgtctcagatcgatttctccgtatagtggtagaaaggagactgcagtttatgcc actgatatacagactgggatggtgattcgctgcaaggtctttattgacaacttctcacgg attcagatttttcataattctatcaagcttgatcttgatggtctttccatgcttagagtc cgcgcttttgataatgaagataacgagttctcctcactggtgggtctacaattcatttgg aagctaatgcctgagagtggtggatcaacacatcatcttgctcatgtgcctttgaaggaa tctccgttgactgactgtggaggactgtgtggctacttagatatccagaaaaagcttgaa gatagtggtgtatttgcagatttgtttgttgtgaagggaactaaaattggacatgagaag gtttcagttcatctgcttgaggctcctctgacccatatagctgatgaaattgtattaacg gttgcagaagccatgtctcttgaacctcgctcacctgtctatgtcctgatgggagcttct tttggttacacgttaaaggtcatgcgtggaaatgttcctcaagccgtggatctaccatca ccacatcatagatggtctgtgttaaactcttctgttgctcaagtggattctttgataggt ctgactaaagcgttaagcttgggggtaacaacagttgttgttgaggatacccgggtcgct ggccacattcaaggatcatctattaatgttgtcactccagatactcttatcttgtacata tcaccttggtcaatgtcaggggatcttattacagaatccaaaccttttccatcatctatg cattggtatgtggtgtctggtcgtcaatatctaattcaaatgaagattttctctggaaga cctgatgcacatgaaatctatataactgagacggatgacataaaactgtatggaaaagat tcagattattggaaaatcgtctcactgccagatgaactttcctctgaatatggtcagcga aattctagaattttgaacgcaatctcaccaggattaggagagctgacatctacattgact tacttcagtgggcatcaagagtcaaaagaggttctcaaggttgtccaagaaattagggtt tgtgaaaaagtgcagttcacattgaacagtgaagatgacacacctaaggttctactccca tggacccctgctgtttatcaggagatggagctaattgtgacaggaggttgtgcaaaagca tcgagtgactacaagtggtttacttcagatataagcattttgtcggtgtcagcttatgga attatccaggcaaagaggcccggtatagccactgtgaaggtggtgtcgactttcgattca caaaattttgatgaggttattgttgaagtttccattccatcctctatggttatgttgcaa aacttcccagtagagacagttgttggatcacacctgaaagctgctgtcacaatgaaggct ttaaatggtgcaacgttctctagatgtgatgcttttaattcattgataaagtggaagacg gggagtgagtcttttgttattgttaatgcaacatctgagatgatgatgttggacgaacta agaagcatggactccagccctccttgttcacgggcttctatatatactgcatctactggc cgcacagtattacaagcaactctggcaaaagagttccattattttgataagtctttgagt gaatcaatagatttgaaagcaactttaactatcggggcctatctgccactttctgtcaga caagatagtgacgggaatcatcatggtggatattggtttgataaggcacaagaggaaact gattttggtgttagtaagctatatcttgtacctggtacatatgttgacgttatgcttctg ggtggacctgaaaggtgggatgacaatgttgagttcaccgagactgtgaagacattatat gaagatgaggaggatcttacaagcagagttaacgtccatcatgaggttgaccgccgtgct aacatgtatagaatttcatgccagaagcttggctcctataaactggtcttcttgcgtggg aatctgctgggtatagaccatcctgtacctgcagttgcagaagctttattgtctgttcat tgcagcttaccatcctctgttgtgctcattgttgatgaacctgttaacaagcttgatgtg attagagctgctagtcaagctgacagggcaccaggacgacttcgtgtaactcctgtgact gtggcaaatgggcaaataattcgtgtggctgctgttggtattagcgagtttggagaagct ttttcaaactcctcaactctttctctcaggtgggaattgaccagttgcaacaatttggca tactgggacgatgattataactcaaaaatgacaaagtctggctgggagagatttctggct ctacgcaatgaatcaggattgtgcactgttcgagccaccgtttctggtattgattattct ttcaaaagccaatactcaactctgcttccacaaggttctgaaagtactctcactgatgct gtacgcttacagttggtttccacactaagagtcacaccagagttcaacctggtctttttc aatcctaatgccaaggtaaacttgtcaatgactggagggagctgtttgtgggaagcagtt gtgaataattctcgtgtagcagaagttattcgacccccatctggcctgcaatgctcgcaa atgatgctatctccaaaagggttggggactacaatcgtgacagtatacgacattggagtt tctcctccactttcagctcttgcgttgataaaagttgcagatgtggactggataaagatt gcatctggggatgagataagtataatggaaggaagtacacactccattgatctcttgact ggcattgacgatggaatgacctttgattcttcccagtactcacttatggacattatggtg catattgaggatgatctcgtggagcatgtcactgttgatgaggattcactttctgttggt gaacacgtggcaacttcctcttttaaaattgctgctagacgactgggaatcacaacccta tatgtcagcgcaagacaacaatcaggaggtaaagtgctaagccaaactattaaagtcgaa gtttattccccaccaagacttcacccacaaggaatatttcttgttcctggtgcttcctat gtgctcactattgaaggaggcccgaccatgaatgtttctgttgactacaccactgtggat aacgaagttgcaaagatcgaaaaatcaggacgcctatatgcaacatctcccggcaacacg acaatctatgcaacaatttacgggagtgaaggtgctgtaatttgtcaggcaattggaaat gccgaagtaggacttcctgctactgcaatgctggtagctcaaagtgacactgtggccgtt ggccatgaaatgcctgtatccccatcatttcctgagggtgaccttttatctttttatgag ctctgcagcgcttacaaatggactattgaagatgaaaaggtgttaattttcattgcatca tccatcaatgtggaagagaatgctggctttgttaatgtcgtccaaggaagatcagctggc aaaaccagagttacaattgccttctcatgtgatttcgtgtctcctggcttgtactctgaa tctagaacatatgaagcgtcaatgattttatctgttgtgcctgatctccctctttcgctt ggggctcctatgacttgggttcttccgcctttttatacatcatctggtctattaccttca tcttcagagccacagaagcatagagatggacaaagtcacagaggcaatatagtctactcc atattgaaagactgcagctctcgggctgattttgaacgagataccatatcaattaatggc gggagtgtcaaaacaactgatagcaacaatgttgcatgtattcaagccaaagaccgcaca agtggaaggattgagattgctgcttgcgtgagagttgcagaggttgctcaaataagaatg aagagtgaggggatccctttccacgtgatagatcttgctgttggcggtgaacttgaactt ccaataaattactatgacactttaggaatcccttttctcgaagcacatggtgttactaca tacaatgtcgaaaccaatcatcgtgatgttgtatttattaagactgtcaatgaccaacca agtgcctacattaagggaataaaacatggcaaagctctcattcgggtttccattggtgat aatctcaggaaatcagattacgttctggtttcagttggggcgcatatctttcctcaaaac ccggtcattcacactggaaatttgttaaatttcagcataacaggggctgataatgaagtc actggtcaatggtttacatcaaacagaagtgtcatatccgtcaatgtggcatctggccaa gctaaagcgatcagccaaggctcaactcacgttacatttaaaggtcatggtttgaaactg caaacaaaagtcacagtgctatttggaaacaccatatatgtcgactctccaggagaaaca ctgacaaatgtccacgtccctgcagaaggatataagtttccagtgaaattcagggagaac aagtttgcagtcactgaacatggaaacaaggccacgtttaactgccaagtagaccctccg tttataggatacacaaagccatggatggatctcgatacgggcaacacttattgtcttttc ttcccatactcaccagagcatcttgttcactccatgtctataacaaaagacatgaaacct catgtgtcattctccgttgatgcttcacttaaagaagctcgacgtgtttcgggatctgca tctgcacttcttataggagggttttctgtaacagggccagataagctgaatataaacccg gattcaaacacgaccatcatttcattagtggggaacaccgatgttcaaattcactgccgc aacaaaggtaggttatcaatcagcttgattaaaagagacgattttggtatcgcagggcat gcacaatacaaggtaaatgtgttaagatcagagcaattcacagatagaatcatcatcact ctacctgctactggccaaattgtagaaatcgatgtctgctatgacacaggagagtcacta gtagcttcgtctaaagatggttactctgttttgttgaagatactatggggcgttttggtg ttggttgtatcagtgatcatcttgatgaaagtgatagatcgacaagtgcccacaggagct actggaacggcaacatacagtggaaatgcagcacagggaacaccagaaagaagaagcggc acagttatataccatgaggaatctccaagaacaccatcaccatttatggagtatgtgaag agaacagtggatgaaactccctactacagaagagaaggaagaagaaggtttaatcctcaa aacactatgtag

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