Arabidopsis thaliana (thale cress): AT5G44500
Help
Entry
AT5G44500 CDS
T00041
Name
(RefSeq) Small nuclear ribonucleoprotein family protein
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT5G44500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT5G44500
03041 Spliceosome [BR:
ath03041
]
AT5G44500
03032 DNA replication proteins [BR:
ath03032
]
AT5G44500
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
AT5G44500
Spliceosome [BR:
ath03041
]
Complex A
U1 snRNP components
Sm proteins
AT5G44500
U2 snRNP components
AT5G44500
Complex B
U1 snRNP components
AT5G44500
U4/U6.U5 tri-snRNP components
AT5G44500
Complex C
U2 snRNP components
AT5G44500
DNA replication proteins [BR:
ath03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
AT5G44500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
834477
NCBI-ProteinID:
NP_199263
TAIR:
AT5G44500
UniProt:
Q9FI15
A0A178UT49
LinkDB
All DBs
Position
5:17927443..17929835
Genome browser
AA seq
254 aa
AA seq
DB search
MSMSKSSKMLQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGNKKT
NEEREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKSGSVTAVAGPGIGRAAGRGVPTG
PLVQAQPGLSGPVRGIGGPAPGMMQPQISRPPQIIRPPGQMPPQPPFAGQGGPPPPYGMR
PPYPGPPPPQYGGQQRPMMIPPPGGMMRGPPPPHGMQGPPPSRPGMPPPGGAPMFAPPHP
GMPPAPPNHHNQQH
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgaagagctccaagatgcttcagttcataaactacaggatgcgagtaaca
atccaagacggaagacagctaatcggaaaattcatggcgttcgatcgccacatgaatctt
gttcttggcgactgcgaagagtttcgaaaacttcctccggcgaaaggtaataagaagacg
aacgaagaaagagaagagcgtcgtacgcttggtttggttttacttagaggagaagaagtg
atttcgatgactgtcgaaggtccaccgccacctgaagaatctcgcgccaaatctggatct
gtaaccgctgtggctggtcccggaatcggtcgtgctgctggacgtggagtacctactggt
ccattggttcaagctcagcctggtttatctggtcctgttcgtggaattggtggacctgct
cctggaatgatgcagcctcagatctctagaccaccacagattattcgtcctccgggacaa
atgccaccacagcctccttttgctggtcaaggaggtcctcctccaccttatggtatgaga
ccaccgtatcctggtccaccaccgcctcagtatggtggacagcaaaggccaatgatgatt
cctccacctggtggtatgatgagaggacctcctccacctcatggtatgcaaggaccgcct
ccttctcgccctggaatgcctccccccggtggtgctccgatgtttgctccgcctcatcct
ggcatgccacctgctccgccaaatcaccataatcagcaacattga
DBGET
integrated database retrieval system
