Amycolatopsis thermalba: L1857_33125
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Entry
L1857_33125 CDS
T08681
Name
(GenBank) HAMP domain-containing histidine kinase
KO
K18351
two-component system, OmpR family, sensor histidine kinase VanS [EC:
2.7.13.3
]
Organism
athm
Amycolatopsis thermalba
Pathway
athm01502
Vancomycin resistance
athm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
athm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L1857_33125
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
L1857_33125
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
athm01001
]
L1857_33125
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
athm02022
]
L1857_33125
01504 Antimicrobial resistance genes [BR:
athm01504
]
L1857_33125
Enzymes [BR:
athm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
L1857_33125
Protein kinases [BR:
athm01001
]
Histidine kinases
OmpR family
L1857_33125
Two-component system [BR:
athm02022
]
OmpR family
VanS-VanR (actinomycete type vancomycin resistance)
L1857_33125
Antimicrobial resistance genes [BR:
athm01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
L1857_33125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HAMP
HisKA
HATPase_c_5
DUF3730
PilJ
Motif
Other DBs
NCBI-ProteinID:
UQS27298
LinkDB
All DBs
Position
6838254..6839366
Genome browser
AA seq
370 aa
AA seq
DB search
MHRAPGLSVRLKLTLSYAGFLMIAGSLLLAAVWMFLLRGWSNGLNIPDLSDFGRAFDPTN
FGPSVFVPAAILVLAFLLVFGLVGGWILAGRMLAPLTRITDATRMAAEGSLSHRIRLPGR
RDEFRELADAFDTMLAQLEAHVAEQQRFAANASHELRTPLAITQTLLDVARNDPHHDSGE
LVDRLHLVNSRAIDLTEALLLLSRADQRSFTPEPVDLSLIAEEATETLLPLAEKRGVTVE
TSGDIAPAIGSPALLLQLTTNLLHNAIAHNLPDRGTVWVTTSVHPTSVLLTVENTGEKLT
PQLVSTLTEPFQRGSQRIRTDHAGVGLGLAIVKSITHAHDGTLTLTPRPAGGLRVTVQLP
AAPPHPSRSP
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
gtgcatagggctcccggtttgagcgttcgcctcaagctcacgctcagctacgccgggttc
ctcatgatcgcgggctccttgctgctcgccgccgtgtggatgttcctgttgcgaggatgg
tcgaacggcctgaacatccccgatttgtccgacttcgggcgtgccttcgacccgaccaat
ttcggcccatcggtcttcgttccggcggcaatactggtgctggcgttcctgctggtgttc
ggtctcgtgggagggtggatcctcgccggccgcatgctcgccccgctgactcgcatcacc
gatgccacccgcatggccgcggagggatcgctgtcccaccggatccggctgccggggcgc
agagacgagttccgcgaactcgccgacgccttcgacaccatgcttgcgcagctcgaagcc
cacgttgccgaacagcagaggttcgcggccaacgcctcacacgaactgcggaccccgctg
gcgatcacgcagacacttctcgacgtggcccgcaacgatccgcaccacgacagcggcgag
ctcgtcgaccgcctccacttggtcaactcccgcgcgatcgacctcaccgaggcgttgctc
ctgctcagccgcgccgatcaacggtccttcaccccagagcccgtcgacctgtccctcatc
gccgaagaagccaccgaaacgcttctcccgctcgcggagaagcgcggcgtcaccgtcgag
acctccggcgacatcgcccccgccatcggctcgcccgcgctcctgctgcagttgaccacg
aacctcctgcacaacgccatcgcgcacaacctgcccgatcggggcaccgtgtgggtcacg
accagcgttcacccgacgagcgtgctgctcaccgtcgagaacaccggcgagaagctcacc
ccccagctggtctcgaccctcaccgaaccgttccagcgcggctcccaacgcatccgcacc
gaccacgcgggtgtcggcctcggcctggcgatcgtcaagagcatcacgcacgcgcacgac
ggaaccctcaccctcactccccgacctgccggcgggctccgcgtcacggtgcaactgccg
gccgcgccaccacacccgagccgatcaccctga
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