Amborella trichopoda: 18423009
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Entry
18423009 CDS
T02990
Name
(RefSeq) transcription factor EGL1 isoform X1
KO
K28363
basic helix-loop-helix transcription factor family protein
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atr03000
]
18423009
Transcription factors [BR:
atr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
18423009
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH-MYC_N
bHLH-TF_ACT-like_plant
bHLH_IRO3
HLH
Chaperone_III
Motif
Other DBs
NCBI-GeneID:
18423009
NCBI-ProteinID:
XP_006827621
UniProt:
W1NGV1
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
MASGLQNQRGVQVNLLRRRLGSAVQGLQWSYGIFWTLSSQHQGVLEWGDGYYNGDIKTRK
TVQPMELTPEEMGLQRSLQLRELYASLSMGESSQQARRPCAALSPEDLTDTEWFYLVCMS
FTFNPGQGLPGRTLSRGQHIWLCNAHNADSKFFSRSLLAKSASIQTVVCFPVPNGVLEMG
VTELVTEEPTSIQRMMTFFLDLTKPACSEQSHSSPQNSDHDYDDLDFAKIGHENPGKDTC
ESETQHFNYYQDDTHNAFSFDISYLPEEGVEFEKEGIKELNGVCEDFKTRSPDFSEHGSS
QQLDDLYMPDGITNTCQVQSCPFIEEENGADGSPNNSDCISQTFVEASPKGEILKPFMQD
AQDSWDGTPLNYGVNGADNSHYSRTLSSILQRGENFKFTEAPRRLSIKSCSSKSSFLLWK
KGSELPRRQIEMPQKMLKKVLFIVGRFRSENSPMTQECDVGKFGVWKKDVEDLNHSHVLS
ERRREKLNEKFLALRLLDPSISKIDKASLLGDTIEYLKELERRVKELEARGTRKQADISE
RTSDNYAITEKYSGNKRKASVLDPAQLDSSRVPLDGIEVTILERDISVEMCCPWRESLLL
EIVQGLSKLQLDAHSIKSSTNNDMLTLSLKAKLRRKVQTTAGELKQTLTRIVGWG
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgggctccaaaaccagcgaggagttcaagtaaacctccttagaagacggctt
ggatcagctgttcagggccttcaatggagttatggtatcttttggacactctcttctcaa
caccagggggttttggaatggggtgatgggtactacaatggtgatattaagacaaggaag
actgttcaaccaatggagcttacccctgaagagatgggtttacagagaagccttcagttg
cgggagctttacgcgtcgctctcgatgggtgagagtagtcagcaggctcgaaggccttgt
gctgctctctctccggaagatctcactgatacagagtggttctacttggtttgcatgtcc
ttcactttcaatcctggtcaaggattgcctggaagaacattatcaagaggtcagcatatc
tggctatgcaatgctcacaatgctgatagcaaattcttctcacgctcacttcttgccaag
agcgcttcaattcagacagttgtatgctttccagtcccaaatggggtgctagaaatgggg
gtgactgaactggttacggaggaaccaacttcaattcaacgcatgatgactttctttttg
gacttaacaaagcctgcttgctccgagcaatctcattccagtcctcaaaactcagaccat
gattacgatgatctcgactttgccaaaattggccacgagaatcctggaaaggatacatgc
gagagcgaaactcaacacttcaactattaccaagatgatacccataacgctttttcattt
gacatctcatacttgcccgaagaaggggtggaatttgaaaaggaaggaatcaaggaactg
aatggagtttgtgaagatttcaaaacaaggtcccctgacttcagtgaacatggctctagt
cagcaacttgacgatttatacatgcctgatggcataacgaatacatgccaagttcaaagc
tgtccattcattgaagaagagaatggggctgatggttcccctaacaatagtgattgcata
tctcagacttttgttgaagcttcacctaagggggagatactaaagccttttatgcaagat
gcccaagatagttgggatggtactccacttaattatggggtaaatggagctgataattct
cattattcgaggacactttcttctattcttcaaagaggtgaaaacttcaaatttactgag
gctccacgaaggctctctattaaaagttgttcttccaagtcgagttttttgctttggaag
aaagggtcagagcttcctcggaggcaaattgagatgcctcagaagatgttgaagaaagtt
ctattcattgtggggaggtttaggagtgagaattctcctatgacccaagaatgcgatgtt
gggaaatttggggtttggaagaaggatgtggaagatcttaatcatagtcatgttttatca
gagaggaggagagaaaagctgaatgagaagtttttggctctgaggttgttggatccatct
attagcaagatcgataaggcttcactacttggggacactatagagtacctaaaagaactt
gagaggagggtaaaagaactggaagcaaggggtacgaggaagcaggctgacatttcagaa
agaacttctgataattatgcaattactgagaaatattcaggaaataaaaggaaagcaagt
gtacttgatccagctcagctcgactccagtagagttcctttggatggcattgaggttacc
attttagaaagagatatctcagtggagatgtgttgtccatggagagagagtttgctgcta
gagatagtccaaggactcagcaaactccagttagatgcacattccatcaaatcctcaacc
aacaatgacatgctaacattatcacttaaagcaaagttaaggagaaaagtgcagacaaca
gctggggagctcaagcaaacccttacgagaattgtaggctggggctag
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