Amborella trichopoda: 18439605
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Entry
18439605 CDS
T02990
Name
(RefSeq) protein SIEL isoform X4
KO
K13141
integrator complex subunit 4
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atr03041
]
18439605
Spliceosome [BR:
atr03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
18439605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_2
HEAT
PDS5
Cnd1
HEAT_EZ
Adaptin_N
MMS19_N
Motif
Other DBs
NCBI-GeneID:
18439605
NCBI-ProteinID:
XP_011625486
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MGHTPSPIPRMEKALTAMITPAAAASSSKKRTATVAGHDNDDAQSNSQKKGGEERSLSLN
KDSILTHFLSHHPATEALNDKQLWMMGALIRHISYCHNDPLHLQAILNLFSEYYSAQPLG
GGEDAPPLIVSTAKTIIHLLSHKKRSNNGSSNYDDMRSRLKAQALSVLLLLTQGQSLPFE
VLAQVEDAILALLSSSLATSVRVRALNLLAAMAVKRRMMKGSSDDDGCEFRILLAFCDDL
YPSVRKAAFEGLMAVVGEESWELLSLRNNGHLALALLKDEDEIIRLYVVRMISSWKGMLG
GNDEAYVGQLDEAFLQLCLLSRDISKEVRCEALLALGRMKLVSEDILLQSLTKKILEVKS
GIVHQSWRRGLVSSAAGAFIHGLEDEFFEVRRAACVSLVRLSSLSRRFAHDALNLLMDML
NDDSMVVRLHTLQALSQMAVLDCLTVQEKHMHMFLGMLVDNNPSIRCETRKLLRKMKLPD
LKVFKTSVQGLLMNLERYPEDEPDILSVIYYVGKSHKKLSIYFAKEFAQEIEPSCEGELK
LDKPHVAALFVLIVTVPLSNERILEFPTKIFSYGLSLLGKISSLEDGIYQEVLSGCLKCM
EHIVMCSVALDTVHAEDAGILHDISMDDKRENLLAETKVVKSEVQFQKTVLDLQHMVSIA
KGIRDTRAFEPEEATRVVKHVLDTVVGTWPLIQARSLNKALKILRTCQEELQMTSCGSSE
SIIDVLVFASQYVEAVMLLAQIWTCLSASKLHAEGKHTVDISLGELDSILKRMRYCFLGL
TREEELHLLELILLSYVLRLSSGGSFTHLTLSRLQETVSYVAQLHDGPSEVSHFMRELKL
AFCQGSEKEQAVVSSCPFPVNKLLELFSLRPIPFSGIMKHIRADMHILDNDSENPIPFIP
GLPVAITYQISLFNVSPNEGKGVWLQMVLGESVQHNFLDLCQFGGSDQLRYIAANIPFYQ
PPKAASFSMRASVMMESSSECLVNVTKDWAATGPKHELICLCAEVKVYLAMKTGCNR
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggggcatactccaagccctatacccaggatggaaaaggctttaacggcgatgataaca
ccggctgctgctgcatcatcgtcaaagaagcgcacagccactgttgctggccatgataat
gatgatgcacaatccaattcacaaaaaaaaggaggagaagaaaggtctctgagtctcaac
aaagactccatcctcacccactttctttctcaccaccctgcaactgaggctttgaacgat
aagcagctgtggatgatgggtgccctcatccgacatataagctactgccacaatgatccc
ctccatctacaagccatcttaaaccttttctctgagtactactctgcacagccactagga
ggaggtgaagatgcacctcctcttattgtttccactgccaaaaccatcattcatctctta
tcgcataagaagaggagcaacaatggcagctccaactatgatgatatgaggagcaggttg
aaagcacaagccctgagtgtgcttctattgttgactcaggggcagagcctcccttttgaa
gtgctggctcaagtggaagacgcgatccttgcactgctgtcctccagcttggctacaagt
gttagggttagggctttgaatctgctggctgccatggctgttaagagaaggatgatgaaa
gggtcatctgatgatgatggatgtgagtttcgcatattgttggcattctgtgatgatctt
tatccatctgtgaggaaagctgcctttgaagggttgatggcagttgttggtgaggagagt
tgggagttattatcgttgaggaacaatggtcatctcgcccttgcgcttctaaaggatgag
gatgagatcattaggttatatgtggttcgaatgattagcagttggaaaggaatgttggga
ggaaatgatgaagcttatgtgggacaacttgatgaagcttttctacagctttgtttactg
tcgagggatataagtaaggaggtcagatgtgaagctcttcttgctcttggaagaatgaag
ttggtatctgaggatattcttctacaatctctgaccaaaaaaattctggaagttaaaagt
gggatagtgcatcaatcttggaggcgaggattggtatcaagtgcagctggagcctttatt
catgggctggaggatgaattctttgaggtaagaagagctgcatgcgtttccttggtgagg
ctgtccagcctctctcggcggtttgctcatgatgccctgaacttgctgatggacatgttg
aatgatgactccatggtagtacgattgcatactctacaggcactgtctcaaatggcagtc
cttgattgcttgacggttcaggagaaacatatgcacatgtttctcgggatgctggtggat
aataatccttcaatcagatgtgaaacaagaaaactactccgcaaaatgaaactgcctgat
ctaaaagtgttcaaaacctcagttcaaggacttcttatgaatttggaaaggtatccagag
gatgaaccagatatcctttctgttatatattatgttgggaaaagtcataaaaaactttca
atctactttgcaaaagagtttgctcaggagatagaaccatcttgtgaaggagaactgaaa
ctagataaaccacatgtagcagcactttttgttttgattgtcacagttcctctctcaaat
gaaaggattctagaatttccaaccaagattttctcctatgggcttagtctccttggtaaa
atctcttccttagaagatggtatataccaagaagtactttctgggtgtttgaagtgtatg
gaacacattgtgatgtgctctgtagcgttggacacggtgcacgcagaggatgctggcata
ctgcatgatatatctatggatgacaagagagagaatttgctggcagaaaccaaggttgta
aaatctgaagttcaatttcaaaagacagtattggatcttcagcatatggtatctattgca
aagggaatccgagatacaagggcttttgagcctgaagaagcaactagggtggtaaaacat
gtgctggatacagtggttggaacgtggcctttgatccaagcaaggtctctcaataaagca
ttgaagatactgagaacctgccaggaagagctgcagatgacgagctgtggctcctctgaa
tctatcattgatgtgttggtctttgcttctcaatacgtggaggctgtaatgctgctagct
caaatatggacatgtttgtcagcgagcaagcttcatgccgaaggaaaacatacggtcgat
atttcattaggggagttggactcaattttaaaaagaatgagatactgctttctgggttta
actagagaagaagaactccatcttttagagcttatactgctgagttatgttttaaggctg
tcaagtggtggatcttttacccatcttaccttgagcagattgcaggaaacagtatcttat
gttgcacagcttcatgatgggccctcagaagtatctcatttcatgcgagaactcaaactg
gcattttgtcaaggaagtgagaaagagcaagctgtagtttcttcttgccccttccctgta
aataagctgcttgaattattctctctcagacctattcccttcagtggaatcatgaaacac
atcagagccgatatgcacatactggacaacgattctgaaaatccaatccccttcattcct
ggactgcctgtggctatcacctaccaaatcagtctattcaacgtttcaccgaatgaaggc
aaaggagtctggctccaaatggttttgggagaatcagtccaacacaactttttggattta
tgtcagtttgggggttctgatcagttgcgatacatcgctgcaaatataccattttatcaa
cccccaaaagcagcatccttctcaatgagagcttctgttatgatggaatcctcatctgag
tgtcttgtcaatgtcaccaaggattgggctgctactggtccaaagcatgagctgatatgt
ctgtgtgctgaggtgaaggtttatcttgctatgaagacgggatgcaacaggtga
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integrated database retrieval system
