Amborella trichopoda: 18441770
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Entry
18441770 CDS
T02990
Name
(RefSeq) triosephosphate isomerase, chloroplastic
KO
K01803
triosephosphate isomerase (TIM) [EC:
5.3.1.1
]
Organism
atr
Amborella trichopoda
Pathway
atr00010
Glycolysis / Gluconeogenesis
atr00051
Fructose and mannose metabolism
atr00562
Inositol phosphate metabolism
atr00710
Carbon fixation by Calvin cycle
atr01100
Metabolic pathways
atr01110
Biosynthesis of secondary metabolites
atr01200
Carbon metabolism
atr01230
Biosynthesis of amino acids
Module
atr_M00001
Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
atr_M00002
Glycolysis, core module involving three-carbon compounds
atr_M00003
Gluconeogenesis, oxaloacetate => fructose-6P
atr_M00165
Reductive pentose phosphate cycle (Calvin cycle)
atr_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
18441770
00051 Fructose and mannose metabolism
18441770
00562 Inositol phosphate metabolism
18441770
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
18441770
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atr04147
]
18441770
Enzymes [BR:
atr01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.1 triose-phosphate isomerase
18441770
Exosome [BR:
atr04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
18441770
Exosomal proteins of bladder cancer cells
18441770
Exosomal proteins of melanoma cells
18441770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TIM
CutC
Motif
Other DBs
NCBI-GeneID:
18441770
NCBI-ProteinID:
XP_011626097
LinkDB
All DBs
Position
Unknown
AA seq
320 aa
AA seq
DB search
MAAVSTSFVSSQLSGGRSVAVRSSSLKKPLLNLQPSSSHSSSLLFDRIARNLQVSGQGCR
GVVAMAGSGKFFVGGNWKCNGTKESISKLVSDLNNAELEQDVDVVVAPPFVYIDQVKTSL
TDRIEVSAQNSWVGKGGAFTGEISVEQLKDIGCKWVILGHSERRHVIGEDDQFIGKKAAY
ALSENLKVIACIGEKLEEREAGKTFDVCFQQMKAFADNIPSWDDVVIAYEPVWAIGTGKV
ATPQQAQDVHMAVRDWLKKNVSAEVASKTRIIYGGSVNGSNCAELAKQEDIDGFLVGGAS
LKGPEFAVIVNSVTSKKVVA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggtatccacatcctttgtatcttcccaactgtctggtgggcgatctgtggcc
gtccgatcctcatctctgaagaagcccttattgaatctccagccttcttcttctcactct
tcttccttactctttgatcgcatcgcccgaaacctccaggtctctggtcaaggttgcaga
ggagtcgtggccatggctggttcaggaaagttctttgttggaggcaattggaagtgtaat
gggacaaaagagagtattagcaagcttgtttctgacttaaacaatgcagaacttgagcaa
gatgttgatgttgttgttgcacctccatttgtatatatcgatcaggtaaaaacctcattg
actgatcgcattgaggtatctgctcagaactcttgggttggtaagggtggagctttcacg
ggtgaaattagtgtggagcaactaaaagatattggctgcaagtgggttattcttggccat
tctgaacggagacatgttattggtgaagatgaccagtttattgggaagaaagctgcttat
gccttaagcgagaacctcaaggtaattgcatgcatcggagagaagctagaagaaagagaa
gctgggaaaacatttgatgtttgtttccaacagatgaaggcttttgcagataatattccc
agctgggacgatgtggtcattgcatatgagcctgtttgggcaattggcactggtaaagta
gcaactcctcaacaagctcaggatgtccatatggctgttcgtgattggcttaagaaaaat
gtctcagccgaagttgcttccaaaacacgcattatctatggaggttcggtgaatgggagc
aactgcgctgagcttgctaagcaagaggatattgatggctttcttgttggtggtgcttct
ttgaaaggtccagaatttgcagtcattgtcaattcagtgacttcaaagaaggtggtagct
tga
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