Amborella trichopoda: 18442334
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Entry
18442334 CDS
T02990
Name
(RefSeq) uncharacterized protein LOC18442334
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atr03036
]
18442334
03400 DNA repair and recombination proteins [BR:
atr03400
]
18442334
Chromosome and associated proteins [BR:
atr03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
18442334
DNA repair and recombination proteins [BR:
atr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
18442334
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HATPase_c_3
ASD2
Motif
Other DBs
NCBI-GeneID:
18442334
NCBI-ProteinID:
XP_020527876
LinkDB
All DBs
Position
Unknown
AA seq
1499 aa
AA seq
DB search
MTLRSSKKRPLGQYLDEEGEAKIYKFKIFMPNGMSVELALQGEAALVRDFIAVVRKEYEK
KTKKHSEQKRTIQWGGDMYLEDILGNRVEGRISFKNYSVKKINMLILHDGHAGTVDTYQN
MWDITPDTELLSELPAEYSFETALADLIDNSLQAVWSNGPCERRLISVTCIERKITIFDS
GQGMDGSEESSIVKWGKMGSSNHRYYRVSAIGGDPPYLLPCFGMYGYGGAVASMHLGRSA
LVSSKTKRSKKVLTLVLARDELLSNSSSEKIWRTDGGIRDPLVEEMQNSPHGSFTKVVIH
EARTEGLDEYQLIYRLKDIYFPYIQYDEMGGKTTMPIEFQVNGVDLAEIDGGEVAVTNLH
SCNGGEFVLQLLFKVNHGMEPSQSLGSKDGGADRVANARLKCVYFPIVEGKESIDKILEK
LKSEGCSISEDFDSFCRVSIRRLGRLLPDARWGRLPFMEPKHWKGDRVQMLKRCYLRVKC
FVETDAGFSPTPYKTDLAHQDPFTTTLRNFGSKQPAKGSATVAKILRDGKNLTLSQLEKE
YREWVCQMHEAFDEEINTGEDEPVVLISPCNKKELGFTSESDVIRVHCIIKRRGRTWECG
EKVKILKGAVGCPKNDLYATLEFILLEGFQGDVGGEARLICRPLDCPDENGALLTKSGNP
SLDIRGSISFPINVIDSGKCHSVDTASWERKLEMKRQKAPALIDPLNAEQCSQLGIDGAL
PSMAQVPAGYMPPKEIVAVFRPHTFLDSRLSSSLDQKFIVKDDLEMKLEIRFSSEGGNHP
DIDIIYSASSKSSSRRGFKGLYIFPLNCCPNLFHKAGAYTFSFSAICGTCTCKRRERRIE
VGPADKIGYWRLLEDVIINSEKFPLKIRVGSSIHNLSIACYDVYGNRMPLTSLPEMEMKF
QKCEAVLLHTNKTLISIVDDKMSLEIKDLLVESSKLDVIRPHYKDTLEIRSQDGFCSIEV
HCQVFPGLPCQVKMRISGRLKHQLQPGDVIQELVLEVLDAYGNHVETGQEISLDLNGFSL
PDQTGQKCKVNDQGCVILSGMLKVTSYGKNARLSVYYDENVLFEEYFEVLSGEFQAISKD
QLMLAPKTELILAEPTDFGVQSQWTREIMFSPQRSPSVAPDHLLPFMDSIVRDQEKLEKD
LENIGVQVKNHETILEKLKHQQSEIDNSICAIKDEIPPEVYQHIDDLGYAKETISKQIER
KSKIAASVLSKRVLPRRVREPQFSFVQDVIGIVALLGSVSSSRLSRVLANYLGENHMLAI
VCKSSEGARTLERFAQDGKMDCNRALHGATFSPSKEHITSQFHVICLEELSHFQGEVETS
QPQSRLNLSHPMLPSARKPSGFQGFAVNMINLDVQNLHTVTDDGRGLRETLFYYLFGELQ
VYRTRADMEMASECADMGAVSLDGGILRRRGHIVLGTAEPYITFPVASSPKEQWDMERIL
HSLKEIEEKNTQKAELAARRDDEHARYMKTLSKFKKKKEQWEKFHKEKVPLLTSWQKNL
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttcgtagttcaaagaagaggcctttggggcaatatttagatgaagagggagaa
gctaaaatttataagtttaaaatttttatgccaaatggaatgagcgtagagttggcattg
caaggggaggcagcattggtccgtgattttattgctgttgtgagaaaggagtatgagaaa
aagacgaaaaagcattctgagcagaagaggactatccaatggggaggtgacatgtacttg
gaagacatactgggcaatagagtggagggaagaatatcctttaagaattacagtgtcaag
aaaatcaacatgcttatcctgcatgatggccatgcaggaaccgtggacacctatcagaat
atgtgggatataactcccgatacagaactgctgtcagagcttcctgcagagtactccttt
gagactgctcttgctgatttgattgataactccttacaagcagtttggtcaaatggtcca
tgtgagagacgcttgatcagcgtgacttgtattgagaggaagattacaatttttgatagt
gggcaggggatggatgggagtgaggagagctccatagtgaaatggggtaagatgggttcg
tccaatcatcggtattatagagtttcagctataggtggtgatccaccatatttattgccc
tgttttggcatgtatggatatggaggtgctgttgcctcaatgcatttgggaagatcagct
ctcgtttcttctaagaccaaaagatcaaagaaagttctgactctagtgcttgctagagat
gaactcttgagtaactccagctctgaaaagatatggaggaccgatggcggtatcagagat
cctttagtggaagaaatgcaaaattcaccgcatgggagttttaccaaggttgttatacat
gaagcaagaactgaagggttggacgagtatcagctgatttacagattgaaagacatctac
tttccatacattcagtatgatgaaatgggtggaaagacaactatgcctattgagtttcag
gtgaatggtgtcgatttagctgaaatcgatggaggggaagtggctgtgacaaatctgcat
tcttgtaatggtggtgaatttgttctacaacttctctttaaagtcaaccatgggatggaa
ccatcacaaagtttaggatcgaaggatggtggggcagatcgtgttgctaatgcccggtta
aaatgtgtttactttcctattgtggagggtaaagaaagtattgataagatcttggaaaag
ctaaagtccgaaggatgcagcatatcggaggattttgatagtttttgtcgtgtatctatt
cgccgattaggacggttacttcctgatgctcgatggggaaggcttccttttatggagcca
aagcattggaaaggagatagagtacaaatgttgaagcgttgctacctgcgagttaaatgc
tttgtggaaacggatgcgggtttctcacctactccttataagactgatttagcgcatcaa
gatccattcacaactaccttgaggaactttggaagcaagcaacctgcaaaaggttccgca
accgttgccaaaatacttagagatgggaagaatttgactctctctcagttggagaaggag
tatcgagaatgggtttgtcagatgcatgaagcatttgatgaggaaataaatactggagaa
gatgaaccagttgttcttattagcccatgcaacaagaaggagcttggttttacttctgaa
tctgatgtcataagagtgcactgtattataaaacggagagggaggacttgggagtgtgga
gagaaggtgaaaattctaaaaggtgcggttgggtgtcccaagaatgatctttatgcgact
ctcgagtttatactattggaaggatttcaaggtgatgttggtggggaagctcgactaatc
tgcaggccattggattgcccggatgagaatggtgcgctgttgacaaagtctggaaatccg
agtttggacattcggggatctatttctttccccataaatgtgatcgattctgggaagtgc
cattctgtagatacagcttcatgggaacgcaaacttgagatgaagagacagaaagctcct
gctttgattgatccgctgaatgcggagcagtgttcccagttagggattgatggggcacta
ccaagcatggctcaagttcctgcaggatacatgcctccaaaggagattgttgcagtattt
aggcctcacacatttcttgattctaggttgtcgagtagcttggatcagaagtttattgtc
aaagatgatctggagatgaaattggaaattagatttagtagtgaaggtggaaatcaccca
gatattgacataatatattccgcaagctcaaaatcttcctcacgtagaggattcaaaggc
ttatatatttttcctttaaattgctgtccaaatttattccataaagctggtgcttatact
ttttctttctccgcgatttgcggcacatgtacatgtaagcggcgagaacgaaggattgaa
gttgggcctgctgataaaattggctattggagattattagaagatgtaattatcaatagt
gaaaaatttcctttgaaaataagggttggctcatccatccacaatctttccattgcatgt
tatgatgtttatggtaatcgaatgccacttacaagtcttccagaaatggaaatgaaattc
cagaagtgtgaagcggtgctgttacatacaaacaaaaccctcattagcatagtagatgat
aaaatgagccttgaaataaaggatttattggtcgagtctagcaagttagatgtgattaga
ccgcattacaaagatactttggaaataagatctcaagatggtttttgctcgattgaagtt
cattgtcaagtttttcctggtcttccttgtcaagttaagatgagaattagtgggagacta
aagcatcagttgcagcctggggatgtaattcaagaattggtattggaggtattagatgct
tatgggaatcatgttgagacagggcaagagatttctcttgatctgaatgggtttagtctt
ccagatcagactggacagaagtgcaaggtgaatgatcaaggatgtgttattcttagtggc
atgttgaaggttacaagttatggcaaaaatgctcgtctatctgtctactatgacgagaat
gtgctgtttgaagaatattttgaagttttatcaggagaatttcaagctatttccaaggat
cagcttatgttagctcctaaaacggagttgattttagcagaaccaactgattttggtgtc
cagtcgcagtggactagggaaattatgttttctccacagaggtcaccctctgttgctcca
gatcaccttctgccttttatggattcaattgttagagaccaagagaaactggaaaaagat
cttgagaacataggagtacaggttaaaaaccatgaaactatactggaaaagctgaagcat
cagcagagtgagattgataatagtatctgtgctataaaagatgaaataccacctgaagtg
tatcaacatattgatgacttggggtatgccaaggaaacaatatcaaaacaaatagaaagg
aagagcaaaattgcagcttcagttttatccaagcgtgtgctgccccgaagagttagggag
cctcagttttcatttgtacaggatgtgattggaatcgtcgcccttcttggttcagtctcc
agcagccggcttagcagagtacttgcaaattacttaggagaaaaccatatgcttgcaatc
gtttgcaaatcttctgaaggtgcgagaacactagagcggtttgctcaagatggcaaaatg
gattgtaaccgtgctcttcatggagccacctttagcccttcaaaggagcatataacctct
cagtttcatgtgatttgccttgaagagttaagccattttcaaggagaagtagagactagt
caaccacagagcagattaaacttgtcacatcctatgctcccatcagcgagaaaaccgtca
gggttccaagggtttgctgtaaatatgattaatttggacgttcagaacttgcacactgtc
actgatgatggccgtggccttcgtgagactctattctattatctttttggtgagctccaa
gtgtatcggaccagagcagatatggagatggcgagcgaatgcgcagatatgggggctgtc
tctctcgatggtggaattcttaggcgcagaggccacattgttttaggaactgcggaacct
tatattacgtttccagtagcatcgtccccaaaggaacagtgggacatggagcgtatcttg
cattctctgaaggagattgaagaaaagaatacccagaaagcagaattggctgcccgtagg
gatgatgaacatgcacgatatatgaagacattgtcaaaatttaaaaagaagaaagaacaa
tgggagaagttccataaagagaaagtgccgttgctaacctcttggcaaaagaatctctag
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integrated database retrieval system
