Amborella trichopoda: 18444744
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Entry
18444744 CDS
T02990
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic isoform X1
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
atr
Amborella trichopoda
Pathway
atr00906
Carotenoid biosynthesis
atr01100
Metabolic pathways
atr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
18444744
Enzymes [BR:
atr01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
18444744
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Paralog
GFIT
Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
HI0933_like
GIDA
FAD_binding_2
Thi4
NAD_binding_8
FAD_oxidored
FAD_binding_3
Motif
Other DBs
NCBI-GeneID:
18444744
NCBI-ProteinID:
XP_011627261
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All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MESMNGLGCSGTCATFIGFHGRMFKTKPLHFCIFFPSSPWPKPIYLNSNNVVRESSNRKI
SYCTITLHEQPQGEEFVDEEDFIKAGGTELLYVQMQQNKPMNDQPKIADKLQSIPSGEIL
LDLVVIGCGPAGLSLAAESAKEGLSVGLIGPDLPFTNNYGVWEDEFKDLGLEGCIEHVWQ
DTAVYLDSNEPLLIGRSYGRVSRNLLHEELLRRCFEHGVTYMNSKVEKIIEECDSHSIVV
CENEVVVPCRLAVVASGAASGKLLKYEAGGPRVSVQTAYGIEVEVKNNPYDPRLMVFMDY
RDSMNDEVQYQNSEFPTFLYVMPMSSTRVFFEETCLASRTAMPFDLLKERLLQRLDKMGI
EVLRTYEEEWSYIPVGGSLPNTDQKNLAFGAAASMVHPATGYSVVRSLSEAPTYASVIAN
VLKKSVQSKDIILYDRLIKRVSLQAWEALWPQERKRQRAFFLFGLELILQLDVEGIRVFF
QTFFSLPNWMWKGFLGSKLSSLELIWFSFYMFLIAPSSMRISLVRHLLIDPSGAALVRAY
LSL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggagtccatgaatggtttgggttgttctggtacttgtgctacatttattgggttccat
ggaaggatgttcaagaccaagcctttgcatttttgtatcttcttccccagttctccatgg
cctaagcccatatatctgaatagcaataatgtagtgagagagagttcaaataggaaaatt
tcttattgcacaattactcttcacgagcaaccacaaggagaagaatttgtagatgaggag
gacttcataaaagcagggggaacagagctcctctatgttcaaatgcagcaaaataagccc
atgaacgatcaacccaagatcgctgataagttgcaatccattccttcaggggagattcta
ctggatttggtagttattggatgtggtccagctggtctctcacttgctgctgaatcagcc
aaggaaggcttgagtgttggacttatcggacctgatctgccatttacaaataattacggt
gtctgggaggatgaatttaaagatctgggacttgaagggtgcattgaacatgtttggcag
gatactgcagtttatttggatagtaatgagcctctccttatcggtcgttcttatggtcgt
gttagtcgaaatttactacatgaagagttattaagacggtgtttcgagcatggggttaca
tacatgaattctaaagtggaaaaaattattgaagagtgtgatagtcacagtattgttgtt
tgcgaaaacgaagtggttgttccttgcaggctcgctgttgttgcctcaggggcagcttct
ggcaaacttttaaagtacgaggccggtggtccaagagttagtgtgcagactgcttatggt
attgaggttgaggtgaaaaataatccctatgatcccaggttaatggttttcatggactac
agagatagcatgaatgatgaagttcaatatcagaattcagagtttccaacttttctttat
gtcatgccaatgtcatccacaagagtcttctttgaggaaacatgtttagcttctagaact
gccatgccatttgatctattgaaggaaagactgctacagcgcttggacaagatgggcatt
gaagttttgagaacttatgaggaggaatggtcatacatccctgtgggtggatccttgcct
aacactgatcagaagaatcttgcgttcggtgctgctgctagcatggttcatcctgccaca
ggctactcagttgtacgctccttatctgaggccccaacatatgcttccgtgattgctaat
gtactaaagaaaagtgtccaaagtaaagatataatactatatgataggcttataaagcgg
gtgtccttgcaagcatgggaagcactttggccacaagaaaggaagcgtcaaagggcattc
tttctttttggtctagagttgattttacaattggacgttgaaggtatcagagtattcttc
cagacctttttcagtttacctaattggatgtggaaaggatttcttggttccaaactttca
tcgttggaactcatatggttttctttttatatgtttctgattgctccaagcagtatgaga
atcagcttggtaaggcatcttttgattgatccaagtggagcagcgttggtgagagcatat
cttagcctataa
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