KEGG   Amborella trichopoda: 18445783
Entry
18445783          CDS       T02990                                 
Name
(RefSeq) ATP-dependent helicase rhp16
  KO
K15083  DNA repair protein RAD16
Organism
atr  Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:atr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:atr03400]
    18445783
DNA repair and recombination proteins [BR:atr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NER4 complex
      18445783
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C DEAD ResIII zf-C3HC4_2 zf-RING_UBOX zf-C3HC4 RING_XB3-XBAT31 zf-C3HC4_3 zf-RING_5
Other DBs
NCBI-GeneID: 18445783
NCBI-ProteinID: XP_020530133
LinkDB
Position
Unknown
AA seq 777 aa
MVRRKAIPVRREAIPVGSSTGGATDFSVSFTEERARRQRNARTSDSEESWSSDSSESDES
LEPKVQSQRQTRPQVNAAVKEEAGDAPEVNDVIDSLRVPKPSETEEDLNMNRSPIRDVVD
ADMIQKNPGVAALRNMRKIYRPTWNFPHKYHFPRLPWEKWEEENIDWLNDSGKKDIELDP
LAPSNGGTPDSIDPSPEILVPLFQFQREWLSWSMKQEESEMRGGILADEMGMGKTLQAIS
LVLKARKLPNPFVKPKMPIDGGLPRVKGTLVVCPLVAINQWKYEIYRFTAQGSNTVLIYH
GTKRFKDALQFSEYDFILTTYSMVVADYRKNVISPKPKKQTKKLFPASGPFHLHSVKWER
IILDEAHCIKDSRRNTAKAVFALESSYKWALSGTPFQKSVEELYSLIRFLQIEPYAYHYC
KYCSCKLLDHRCHESGFHCENENCGHSTSKHFRWWNKYVAKPASFPTSDGRQAMFLLKYK
ILKSTFLRRTKKERAADLALPPKNTILKEYNLDNREEEFYQPLYSQIHSQFNTYITEGTL
MNNYAHIFYLLTRLRQAIDHQYLVVFFDSSQSNQIGPADADQLCGICHDPVEDSVVTSGG
HTFCQACFLDFTKTPGQVKWPSCSESLTIDLTTKGNSKYGSSKMAVRGFKRSGVIDQIKN
LDNFQTSTKIEALKEEIFLMYERDAAAKAIVFSQFSSFLDLISFALDKEGVRCIQLVGSM
SLAARDEAIKTFTDDPDCRVFLMSLKAGGMALNLTVASHVFLMDPWWNPAVEQQAQD
NT seq 2334 nt   +upstreamnt  +downstreamnt
atggtgcgaaggaaagcaattccagtgcgaagggaagcaattccggtgggaagctcaacg
ggaggagcgactgatttctctgtgtcattcaccgaagaaagagctagaaggcaaagaaat
gcacgcacttctgattcagaagaatcttggtcatctgattcgagtgaatcggatgagtcc
ttggagccaaaggttcaatctcagagacaaaccaggccccaggtgaatgccgcagtcaaa
gaagaagctggtgatgcacctgaagtgaatgatgtgattgattctttgagagtaccaaaa
cctagtgagactgaggaagatttgaacatgaatagaagcccaattcgtgatgtcgttgat
gcagatatgatacagaaaaaccctggtgtcgcagccctaaggaatatgaggaagatatac
aggccaacatggaacttcccacataaataccatttcccgcgattgccatgggaaaaatgg
gaggaagagaacattgactggttaaatgattctggaaaaaaagatattgaattggatcct
ttggccccctctaatggtggaacccctgattcaattgacccatctcctgagatattggtt
cctctatttcagtttcagagagaatggttatcttggagcatgaagcaagaggagtcggag
atgaggggtggtattcttgccgatgaaatgggaatgggaaagacccttcaagccatatcc
cttgttcttaaagcccgaaaacttccaaaccctttcgttaaacccaaaatgcccattgat
ggtggtttgcctagagtgaaaggaacccttgtggtttgccctcttgttgctatcaatcaa
tggaaatatgagatctataggtttacagctcaaggaagcaacacagttcttatatatcac
ggcaccaaacgatttaaggatgctttgcagttctcagagtatgatttcattctaaccacc
tactccatggttgtggcagactacaggaagaatgttattagtccaaagccaaagaagcaa
accaaaaagctgtttccagcctcggggccatttcatttgcattcggtaaaatgggagcgc
atcatcttggatgaggcacactgtataaaagacagccgaaggaacactgcgaaggctgtt
tttgctttggaatcttcttataaatgggctctaagtggcaccccttttcagaaaagtgtt
gaagagttgtattcattgatacgctttctgcagatagaaccttatgcatatcactattgc
aagtattgttcctgcaaattactcgatcatagatgccatgaaagtggatttcattgtgag
aacgagaactgtggccattcaacttcaaagcatttccgttggtggaataagtatgtggca
aaaccggcatcctttcctactagtgacggcagacaagccatgtttcttcttaaatacaaa
attttgaaaagcacctttcttcgtcgtaccaagaaagagagagctgcagatcttgcactt
cctccaaagaatactattttgaaggagtataatttggataacagagaggaggaattctat
caaccactgtattctcaaatccactctcaatttaacacttacatcactgaaggaacttta
atgaacaactatgcccacattttttatctcctcacacggttacggcaggcaattgatcat
caatatttagtggtattctttgattcatcacaatcaaatcagattggccctgctgatgca
gatcagttatgtggaatctgtcatgatccagtggaggattccgtggtcacttctggtggg
cataccttttgccaggcatgtttccttgattttactaaaactccagggcaagtcaagtgg
ccttcttgctcagagtccctcactatcgacttaactacaaaagggaactcaaaatatggg
agtagcaaaatggctgtcagaggatttaaacgttcgggagttattgatcagattaagaat
cttgacaattttcaaacgagtacaaaaatagaagctttgaaagaagagattttccttatg
tatgaaagggatgcagctgcaaaggcaatagtgttcagtcagttcagttcatttttggat
ctgataagcttcgctcttgataaggaaggtgtaagatgcattcagttggtggggagcatg
agtttggcagctagggatgaggcaataaagactttcactgatgacccagactgcagggtc
ttccttatgagcttaaaagcaggaggcatggctctcaatctcactgtcgcttcccatgtt
ttcttgatggatccatggtggaatccagctgtggagcaacaggcccaagattga

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