Amborella trichopoda: 18445784
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Entry
18445784 CDS
T02990
Name
(RefSeq) DNA repair protein RAD16
KO
K15083
DNA repair protein RAD16
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atr03400
]
18445784
DNA repair and recombination proteins [BR:
atr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
18445784
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-C3HC4_3
zf-rbx1
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
18445784
NCBI-ProteinID:
XP_006855976
UniProt:
U5DAL1
LinkDB
All DBs
Position
Unknown
AA seq
933 aa
AA seq
DB search
MVRRKATTVRRSNRAKRQRNAPTSDSEDSWQSDSGGDPTVSSDFSSSESDESSVPKVQVR
RRTRSHVSASVQEEASDPPEVNGVIVDALRDLNHGDIDDALGGLNHDGGLNHDGVNEDMI
QRNHGVAAPRKRRKRNYRQTWNFPHKYHFPRLPWEKWEEENIEWLVDSGKEDIELDSVAP
FYGGTPDSIDPSSEILVPLLQFQREWLAWSMKQEESVMRGGILADEMGMGKTLQAISLVL
KARELRKPSLAKSQIPIDGALPRVKGTLVVCPVVAIIQWANEISRFTAQGSARVLIYHGA
KRFKDALQFSEYDFILTTYSIVEAEYRKNVMSPKAKCQWCGKSFYPKKLVIHQKYFCGPS
AMKTEKQSKQVKKKTKIKVKAKNKSFEKDNEIETEIVVGKEKGKDKAMERTRQKTVRIQT
SDETRIPHGTSEASSATGGSALGSSLLHSVKWERIILDEAHFIKDRRCNTAKAVFALESS
YKWALSGTPLQNRVGELYSLIRFLQIEPYSYYYCKDCDCKSLDHRYDEDGKRCQNCGHSP
LKHFCWWNKYVANPIMASSSISEARQAMFLLKYKLLKSTVLRRTKKERAADLALPPRVTI
LREDSLDNREEDFYEALYTQSQSQFNTYIAEGTLMNNYAHIFDLLTRLRQAVDHPYLVVY
SDSQQSNNQIGPADAMQYCGICHDPAEDSVVTSCGHTFCKACVLDFTETSGQVMCPCSKP
LTVDLTTKENSKDGSSKMAVKGCKRSRIMNQIKNLDDFQTSTKIEALKEEIFLMHERDAA
AKAIVFSQFTSFLDLINFSVRKAGVRCVQLVGSMSLAARDEAIKTFTDDPDCRVFLMSLK
AGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFVIANSIEERILKL
QEKKKLVFEGTVGGSSEALGRLTQADLRFLFQT
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgaaggaaagcaacgacagtacgaaggtcaaaccgagctaaaaggcaaagaaat
gcacctacttctgattcagaagattcatggcaatctgattcgggtggtgatcccactgtt
tcatctgattttagcagctcagaatcagatgaatcctctgtgccaaaggttcaagttcgg
agacgaaccaggtcccatgtgagtgcctcagtccaagaagaagccagtgatccacctgaa
gtgaatggtgtgattgttgatgctttgagagatctaaaccatggtgacattgatgatgct
ttgggaggcttaaatcatgatggaggtttaaatcatgatggagttaatgaagatatgata
cagcgaaaccatggtgtcgcagccccaagaaaaaggagaaagagaaattacaggcaaaca
tggaacttcccacataaataccatttcccgcgattgccctgggaaaaatgggaagaagag
aacattgaatggttagttgattctggaaaagaagatattgaattggattctgtcgccccc
ttttatggtggaacccctgattcaattgacccatcttctgagatattggtacccttatta
cagtttcaaagagaatggttagcttggagcatgaaacaagaggaatcggtgatgaggggt
ggtattcttgctgatgaaatgggaatgggaaagacccttcaagccatatcccttgttctt
aaagcccgagaacttcgaaaaccaagtttggctaagtcccaaatacccatcgatggtgct
ttgcctagagtgaaaggaactcttgtggtttgtcctgttgttgctatcattcaatgggcg
aatgagatctccaggtttacagctcaaggaagcgccagggttcttatctatcatggcgcc
aaacgattcaaggatgctttgcagttctcagagtatgatttcattctgaccacctactcc
atagttgaggcagagtataggaagaatgtcatgagcccaaaggctaagtgtcagtggtgt
ggtaaatccttttatccgaagaaattggttattcatcagaagtatttttgtggtccttct
gctatgaagacagagaagcagtccaagcaagtaaagaaaaagacgaagatcaaggttaag
gcaaaaaataaatcatttgagaaagataacgagatcgaaactgaaattgtggttggtaag
gagaaagggaaggacaaagctatggagcgaactcgtcaaaaaacagtgcgtattcaaact
tcagatgaaacacgaattccccatggaacaagtgaggcctcgagtgccactggtggttca
gccttggggtcatctcttttgcattctgtgaaatgggagcgcataatattggatgaggca
cactttataaaagacagacgatgcaacactgcgaaggctgtttttgctttggaatcttcc
tataaatgggctctaagtggcacccctcttcagaatcgtgttggagagttgtattcattg
atacgctttctgcagatagaaccttattcatattactattgcaaggattgtgactgcaaa
tcactcgatcacagatacgatgaagatggaaagcgttgtcagaactgtggccattcacct
ttgaagcatttctgttggtggaataagtatgtggcaaatccgataatggcgtcctcttct
attagtgaggccagacaagccatgtttcttcttaaatacaaactattgaaaagtaccgtt
cttcgtcgtaccaagaaagagagggcagcagatctcgcgcttcctcccagagttactatt
ttgagggaggatagtttggataacagagaggaggacttctatgaagcactatatactcaa
agccaatctcaatttaacacttacatcgctgaaggaactttaatgaacaactatgcccac
atttttgatctcctcacacggctacggcaggctgttgatcatccatatttagtggtgtat
tcggattcacaacaatcaaacaatcagattggccctgctgatgcaatgcagtattgtgga
atctgtcatgatccagcagaggattctgtggtcacttcctgtgggcataccttctgcaag
gcttgtgtgcttgattttacggaaacttcagggcaagtcatgtgtccttgctcaaagccc
ctcactgttgacttaactacaaaagagaactcaaaagatgggagtagcaaaatggctgtc
aaaggatgtaaacgttcgagaattatgaatcagattaagaaccttgacgattttcaaact
agtacaaaaatagaagctttgaaagaggagatttttcttatgcatgaaagggatgcagct
gcaaaggcaatagtgttcagtcagttcacttcatttttagatctgataaacttctctgtt
cgtaaggcaggtgtaagatgcgttcagttggtggggagcatgagtttggcagctagggat
gaggcaataaagactttcactgatgacccagactgcagggtcttccttatgagcttaaaa
gcaggaggcgtggctctcaatctcactgttgcttcccatgttttcttgatggatccatgg
tggaatccagctgtggagcaacaggcccaagatcgaattcaccgaattggacaatataaa
ccaattcggattgttagatttgtaattgcaaactcaatcgaggagaggattttgaagctg
caagagaagaagaaattagtatttgaagggactgtgggtggatcttcagaggcactggga
agattaacccaagcagatctacgattcttgttccagacttag
DBGET
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