Amyelois transitella (navel orangeworm): 106133582
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Entry
106133582 CDS
T09957
Name
(RefSeq) probable nuclear hormone receptor HR38
KO
K08558
nuclear receptor subfamily 4 group A member 2
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atra03000
]
106133582
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
atra03310
]
106133582
Transcription factors [BR:
atra03000
]
Eukaryotic type
Zinc finger
Cys4 nerve growth factor IB-like
106133582
Nuclear receptors [BR:
atra03310
]
4. Nerve growth factor IB like
4A. Nerve growth factor IB like receptor
106133582
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Herpes_IE1
Motif
Other DBs
NCBI-GeneID:
106133582
NCBI-ProteinID:
XP_060810268
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Position
2:join(8417488..8417587,8425862..8425938,8426233..8427664,8428184..8428440)
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AA seq
621 aa
AA seq
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MRILLSELGLSGACFGLTLESRETSLDPDKPAPGPSALEPRSPSAFTSNTSSMLLLQTHS
NYGTSFTDLLSPQYQEDSSEILEENLDPFPDVEFHAPVPVEVKLQRTTPVSDPSSPTLGP
TLPSFEETYSVRYPKQEMAEFGIKMDEDCYNVSSYSHQGHTSTQLLYPYHQPSIPYVSST
YYAPAQPCSPTFDTGGVTHNQDSYSLPPFPSSVDLQIATDQANRQRRASLPVQRSESNSS
NDSPKLHGGRIHCMQASTPSSASSSPGGVPPEGVGPRAAPSSPSQLCAVCGDTAACQHYG
VRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTD
SLKGRRGRLPSKPKCPQESPPSPPISLITALVRAHVDTSPDFANLDYSQYREPNPMEPPM
SDLEVIQQFYSLLTTSIDMIKVFAEKVPGYADLCPEDREQLFASARLELFVLRLAYRTRP
EDTKLTFCNGLVLDKRQCQRSFGDWLHAVLDFSNTLHSMEIDISTFACLCALTLITERHG
LKEPHRVEQLQMKIIGCLRAHMPGGGTNPGGAPHFSRVLGALPELRSLSVQGLQRIFYLK
LEDLVQPPPLIENMFRASLPF
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcctgctgagcgagctgggactgtccggcgcgtgcttcggcctgaccctggag
tcgcgcgaaacctcgctggaccccgacaagcctgcgccagggccgagcgccttagaaccg
cgctcgccaagcgccttcacgtccaacacatccagtatgctactgctgcagacacacagc
aactacggtacatcttttactgatttattgtcaccgcaatatcaagaagactcgtccgaa
atcttagaagagaatttggatccatttccagacgtcgaatttcacgctccagtccctgtc
gaagtgaaattacagcgtacgacacctgtcagcgatccttcttcaccaactcttggccct
acactgcctagttttgaagaaacatattctgttcggtatccaaaacaagaaatggcggag
tttggtataaaaatggatgaagactgttacaatgtcagctcctactctcatcaaggtcac
acttctactcaattactgtacccatatcaccaaccatcaataccgtacgtctcgtcaact
tattatgctccagcgcaaccatgcagtcctacatttgatacaggaggagtaactcataat
caggactcttattcactgcctcctttcccgagctcggttgatctccaaatagctacagat
caagcaaatagacaaaggcgagcatcattaccggtgcaacgttctgaatcgaacagttca
aatgatagccctaagctgcacggtggcagaatacactgtatgcaggcttcaacacctagt
tcagcttcaagttctcctggcggggtgcctcctgaaggggtgggcccgcgagctgcgccg
tcttcgccaagtcaactatgtgctgtttgtggagacaccgctgcttgtcagcattatgga
gtaagaacttgtgaaggatgtaaaggattcttcaaaagaacagtacaaaagggatcgaaa
tatgtttgtctagcagagaaatcttgcccagttgataaaagaaggcgaaatcgatgccaa
ttctgtcggtttcaaaaatgccttgccgttggtatggttaaggaggttgttcgcacagac
tcattgaaaggaagacgaggaagattaccttcgaagcccaaatgtcctcaagaatcacca
ccaagcccaccaatttcacttatcacagctttggtcagagcacatgttgacacttctcca
gattttgccaatttagactactctcaatacagagagccaaatccaatggaacctccgatg
tctgatttggaagtgatccaacagttttattctttgcttaccacgtcgattgacatgatc
aaagtttttgctgaaaaagttcctggttatgctgatctgtgcccagaagatcgtgagcaa
ttatttgcttctgcaagattggagttatttgtgctacgattggcttatcgcacacgccct
gaagataccaaactcactttctgcaatgggcttgtactagacaagagacagtgtcaacgg
tcatttggagactggttacatgcggttttggattttagtaacaccttacattcaatggag
atcgacatttcaacgtttgcctgcctttgtgcattgactttaataacagagagacacggg
ttaaaagaaccccatcgtgtggaacagctgcagatgaagatcatcggatgtctgagggcg
cacatgccaggcggcggcacgaaccccggcggcgccccacatttcagccgggtgctggga
gccctgcccgaactgcgctcactttccgtgcaaggacttcaacgcatcttctatctcaag
ctggaggacctcgtgcaacctccgccactcattgaaaacatgttccgcgccagcctacct
ttctag
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