Amyelois transitella (navel orangeworm): 106134492
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Entry
106134492 CDS
T09957
Name
(RefSeq) LOW QUALITY PROTEIN: fringe glycosyltransferase
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra00514
Other types of O-glycan biosynthesis
atra04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
106134492
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
106134492
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
atra01003
]
106134492
Enzymes [BR:
atra01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
106134492
Glycosyltransferases [BR:
atra01003
]
Glycan extension
O-Glycan
106134492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
DUF604
Motif
Other DBs
NCBI-GeneID:
106134492
NCBI-ProteinID:
XP_013190010
LinkDB
All DBs
Position
5:complement(join(9803610..9803664,9804328..9804505,9805985..9806055,9806573..9806658,9807075..9807222,9815141..9815243,9815670..9815718,9822670..9823018))
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AA seq
345 aa
AA seq
DB search
MSDKVLRLSQAYRCSAPSGSGMGGRRMIKAAIVLIALGYCSLLVYQGGVSFNFQERPVQV
GDLSIEPVTKTSVLDSGQNKNITLDDIFISVKTTKHYQDTRLPIILKTWFQLAKEQTWFF
TDTDNPKHQNQTNGHMVNTNCPASHQSEHLCCKMSVEYDYFLESGKKWFCHFDDDNYVNV
PRLVKILQNYNHQEDWYLGRTSVSKPVKIFKKPTNKLWFSFWFATGGAGFCISRSLALKM
LPIASGGRFITVCEGTRLPDDMSIGFIIEYLMKKNMTPISEFHSHYEQMKLLPSETFKDQ
ISFSYAKTKNEWNVVNVPGFDTRYDPTRFLSLHCFLFPQFKFCPR
NT seq
1039 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaggtgctcagactttctcaagcttatcggtgcttcggcgccatccggctc
tggcatgggagggcgaaggatgattaaagcagcaattgtgctgatagcacttgggtactg
tagcctcttagtatatcaaggaggagtcagtttcaacttccaagaaagaccagtgcaagt
gggggacctttctattgaacctgtgacgaaaacgagtgtacttgacagtggacaaaataa
aaacataacattagatgacatttttattagtgttaaaacaactaaacattatcaggatac
aagattgccaattatcttgaagacatggttccaattggcaaaagaacaaacttggttctt
cacggacacagacaatccgaaacaccaaaatcaaacgaatggtcacatggtgaacacgaa
ctgcccggcgtctcatcagagcgagcacctctgctgcaaaatgtcggtagaatacgacta
tttcttggagagtgggaagaaatggttctgccatttcgacgatgacaactatgtgaacgt
gcctcgactagtcaagattttacagaactacaaccaccaggaagactggtatctcggtag
aacgtcagtcagcaaacctgtcaaaatatttaagaaacccactaataagttatggttttc
attttggttcgcgaccggaggcgccgggttttgcattagcagaagtttggccctcaaaat
gttacctatcgcaagcggtgggcgattcatcacagtctgcgagggcacgagattgccgga
cgatatgtcaataggctttattattgaatatctgatgaagaagaacatgactccaatctc
ggaattccactcacattacgagcagatgaaactactcccatcggagaccttcaaagacca
gatctcgttcagctacgccaagactaagaatgagtggaatgtcgtcaacgtacctggttt
cgataccagatacgatcctacaaggttcctctcgctgcattgtttcctgtttccccaatt
taagttctgcccgagatag
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