Amyelois transitella (navel orangeworm): 106134559
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Entry
106134559 CDS
T09957
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra04013
MAPK signaling pathway - fly
atra04120
Ubiquitin mediated proteolysis
atra04140
Autophagy - animal
atra04144
Endocytosis
atra04214
Apoptosis - fly
atra04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106134559
09130 Environmental Information Processing
09132 Signal transduction
04013 MAPK signaling pathway - fly
106134559
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106134559
04140 Autophagy - animal
106134559
09143 Cell growth and death
04214 Apoptosis - fly
106134559
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
106134559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atra04131
]
106134559
04121 Ubiquitin system [BR:
atra04121
]
106134559
Enzymes [BR:
atra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106134559
Membrane trafficking [BR:
atra04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
106134559
Ubiquitin system [BR:
atra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
106134559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-TRAF
U-box
zf-rbx1
Sina_ZnF
zf-RING_5
zf-Nse
RING_XB3-XBAT31
zf-ANAPC11
TRAF3_RING
zf-RING_6
Prok-RING_4
DUF7084
zf-RING_10
Zap1_zf1
zf-P11
Motif
Other DBs
NCBI-GeneID:
106134559
NCBI-ProteinID:
XP_013190098
LinkDB
All DBs
Position
6:complement(join(2602986..2603313,2604367..2604530,2605391..2605469,2605720..2605880,2607220..2607413,2607763..2607884,2608397..2608548,2608884..2608925))
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AA seq
413 aa
AA seq
DB search
MDPNRTKNASEGIAPIGITSLSDMDLLNQPESRYECPMCLNWLRDPVITTCGHKFCKSCI
TPWIQNSGHCPIDNNNLSMKIDIFPDNCTKREIQEQRLVCPYANKGCTAKVMPLDLDAHI
ESCPYNAPQTSSRTEARVPCSFHAIGCKETFDTQQDMHDHLNLDTQKHLSLLMNAYSELK
MNNDMVNANIDAKEQEAMTLWEAPGKGDSQACAAPLNNTSALIRSVFERVVILEQRNREQ
DIVIANLTKQVATLSAQLKHNTVRYCMGNYIWKIDNFGARLDQMLKNHNNMLYSPAFYTS
PNGYRFCVRLNISAQNPLCFALHVHMMRSDFDDCLDWPFNGRISFTMVNQYDPDKTQKDT
MMSNSTLKAFQKPTADLSSRGFGFTEYAAVKDVLANGFVKDDVLVIRVQIRCV
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaacagaacgaaaaatgcttcagagggtattgcgcccattggaataacctct
ctaagtgacatggacttgttaaaccagcccgagtctcggtatgaatgtccaatgtgtctc
aattggctcagagaccctgtcatcaccacttgtggccacaaattctgcaagagctgtatc
actccgtggattcagaacagtgggcactgtcctatagacaacaacaacctgagcatgaag
atcgacatctttccggacaactgcacgaaacgggagatccaagaacagcggctggtctgt
ccatatgctaacaaaggatgtacagctaaagtgatgcccctagacctcgatgctcacata
gaatcgtgcccgtacaatgctccacaaacctcgtcccggactgaagcacgggtaccgtgt
tctttccacgccatcggctgcaaggagacatttgacacccagcaagatatgcatgaccat
ttgaatttggacactcaaaaacatttaagtttactaatgaacgcgtattcggaactgaaa
atgaacaacgacatggtaaatgcgaacatagacgccaaggaacaagaggccatgaccctg
tgggaggcgcccggcaagggagactcgcaggcctgcgccgcgccgctcaacaacaccagc
gctctcatcaggtctgtgtttgagcgcgtggtgatactggagcaaaggaaccgggagcag
gacatcgtcatcgcgaaccttacgaagcaggtggcaacactatcggctcaattgaaacac
aacaccgtgcggtactgcatggggaattacatctggaagattgacaactttggagcgaga
ctcgatcagatgctcaaaaatcacaacaacatgctctacagcccggcgttctatacctcg
cctaatggttaccgattctgcgtccgcctcaacatatcagctcagaaccctctctgcttc
gctctccacgtgcacatgatgagatccgacttcgacgactgcctcgactggccgttcaac
gggcggatatcattcaccatggtgaaccagtacgaccccgacaagactcagaaggacacc
atgatgtccaactccacgctgaaggcgttccagaagccgacagctgatctgtcgtcacgt
gggttcggttttacggaatacgcggctgtcaaagatgtgctggcgaatgggttcgtgaaa
gatgatgtgctggttataagggtgcagatcaggtgtgtatga
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