Amyelois transitella (navel orangeworm): 106140001
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Entry
106140001 CDS
T09957
Name
(RefSeq) NHP2-like protein 1
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
atra
Amyelois transitella (navel orangeworm)
Pathway
atra03008
Ribosome biogenesis in eukaryotes
atra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106140001
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106140001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atra03041
]
106140001
03009 Ribosome biogenesis [BR:
atra03009
]
106140001
Spliceosome [BR:
atra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
106140001
Ribosome biogenesis [BR:
atra03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
106140001
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
PELOTA_1
RNase_P_pop3
Adenosine_kin
Motif
Other DBs
NCBI-GeneID:
106140001
NCBI-ProteinID:
XP_013196972
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All DBs
Position
11:complement(join(58008..58394,58576..58578))
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AA seq
129 aa
AA seq
DB search
MAEEAAVNPKAYPLADAALTAKILNLVQQAANYKQLRKGANEATKTLNRGLSEFIIMAAD
AEPLEIVLHIPILCEDKNVPYVFVRSKQALGRACGVSRPIISCSITINEGSQLKPQIQSI
QQEIERLLV
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaagcagcggttaatcccaaagcgtatccgttggcggacgcagcactgact
gccaaaatcttaaaccttgttcagcaagctgcaaactacaagcaattaagaaaaggtgct
aatgaagccacaaaaaccttaaatagaggtctctcagagtttattataatggctgccgat
gcggagcccttagaaatcgtgcttcacattcctattttatgcgaggacaagaatgtgcca
tatgtgtttgtgagatcaaagcaagcgcttggccgtgcgtgcggcgtgtctcggccaatc
atttcctgctccatcactattaatgaagggagtcagctgaagcctcagatccaaagtatc
cagcaagaaattgaaagactcttagtttaa
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