Amyelois transitella (navel orangeworm): 106142101
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Entry
106142101 CDS
T09957
Name
(RefSeq) tRNA pseudouridine(38/39) synthase
KO
K01855
tRNA pseudouridine38/39 synthase [EC:
5.4.99.45
]
Organism
atra
Amyelois transitella (navel orangeworm)
Brite
KEGG Orthology (KO) [BR:
atra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atra03016
]
106142101
Enzymes [BR:
atra01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.45 tRNA pseudouridine38/39 synthase
106142101
Transfer RNA biogenesis [BR:
atra03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
106142101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
106142101
NCBI-ProteinID:
XP_013199182
EnsemblRapid:
LOC106142101
LinkDB
All DBs
Position
30:join(1719144..1719218,1719299..1719432,1719896..1720097,1720790..1720956,1721779..1721984,1722722..1722869,1723180..1723332,1723883..1724043,1724805..1724857)
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AA seq
432 aa
AA seq
DB search
MDKVPPKTKKFKGASKEDLEKIDKNELIERIIQLEAHNLQLKNIISKNLSGEHEDAKNDK
NNKRSFDFSKCHYRKVLIRILYFGWDYQGLAVQEDSNQTIEHHLFHALTKSCLIQSREMS
QYHRCGRTDKGVSAFGQVISITLRSKFSPEEHKTQTLDSEMQYCKILNRLLPKDIRAVAW
MPIPDDRPEFSARFDCEKRHYKYYFPRSNLNLQSMRQAANYLVGSHDFRHLCKMDVGNGV
TEFRRNVLGADILAVEEENDDPTTMYCLVIQGNAFLWHQIRCIMAVLLLVGQGLESPDIV
KELLDVDTHPRKPQYSMALDIPLNLFHCSYPLELSQPWHYDVDELRNTISQLQAEWTVQN
VKSTMIKDTLKQLESAYCKCARETGSVESVMAYADCLTQGVKSKVYTPLLKRETCSSLEE
MIEFYKKKRKLN
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggataaagtaccaccaaaaactaaaaaatttaaaggcgcgtccaaggaagatctagaa
aaaatagacaaaaacgaactcattgaaagaataatacagttagaagctcacaatctacaa
ttgaaaaatattattagtaaaaacctgtcaggggagcatgaagatgctaaaaatgataaa
aataataaacgttcatttgatttctcaaaatgtcattaccgcaaagtactcattcgcata
ctctacttcggctgggactaccaaggacttgcggtacaagaagatagcaatcagacgatt
gaacaccatctcttccacgcactgaccaaatcctgcctgatacagagtcgggagatgtct
cagtaccaccgttgtggacggacggacaaaggtgttagtgcttttggtcaggttatatca
ataacattacgaagcaaattctcaccagaagaacacaagacgcaaactttggattccgaa
atgcagtattgcaagatattaaaccgattattgccaaaagacatccgggctgtggcgtgg
atgccaatacctgatgatagaccagagttcagtgctcgattcgattgtgagaaacgccat
tacaaatactactttccccgttcaaacctcaacttacaatctatgcgacaagccgccaac
tacttagtcggctcccacgacttccgccatctttgcaagatggacgtcgggaacggcgtc
acggagtttaggagaaatgtgctcggagcggatattttggctgtggaggaagaaaatgat
gacccaacaacaatgtactgcctggttatacagggtaacgcattcctctggcatcagatc
cggtgtatcatggcggttttattactggtgggacagggtctggagtcaccggatatcgtg
aaggaattactggacgtagatacccatcctagaaaaccacaatacagcatggcgttggac
attcccctgaacctgttccactgttcatatcccctggagttgtcacaaccctggcattac
gatgtggatgagttgcggaatacaatttctcagttacaagccgagtggacggtgcagaat
gtcaaatcaacaatgataaaggacacactcaaacagttggaatcggcatattgcaaatgt
gcaagggagacgggtagcgttgagagtgtgatggcatatgcagattgtctgacacaaggc
gtcaagtccaaggtttacacgcctttgttgaagcgggagacgtgttcgagtctagaagaa
atgatagagttctacaaaaagaaaaggaaacttaattaa
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