KEGG   Amyelois transitella (navel orangeworm): 106143440
Entry
106143440         CDS       T09957                                 
Name
(RefSeq) nuclear pore membrane glycoprotein 210
  KO
K14314  nuclear pore complex protein Nup210
Organism
atra  Amyelois transitella (navel orangeworm)
Pathway
atra03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:atra00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106143440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:atra03019]
    106143440
Messenger RNA biogenesis [BR:atra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     106143440
SSDB
Motif
Pfam: Ig_NUP210_1st Ig_NUP210_2nd Big_2 Ig_NUP210_3rd Ig_NUP210_4th DUF6034
Other DBs
NCBI-GeneID: 106143440
NCBI-ProteinID: XP_060804760
LinkDB
Position
17:join(3248088..3248251,3248329..3248479,3249095..3249215,3249304..3249391,3249996..3250226,3250469..3250940,3251144..3251229,3251498..3251677,3252175..3252306,3252936..3253021,3253959..3254122,3254788..3254916,3255290..3255429,3255869..3256076,3256306..3256425,3256753..3256953,3257471..3257713,3258567..3258713,3259404..3259514,3260046..3260238,3261073..3261173,3266136..3266417,3266756..3266916,3267452..3267591,3268421..3268602,3269434..3269626,3270103..3270279,3270988..3271278,3271588..3271820)
AA seq 1708 aa
MENIRKTITFISLLCIFTNCCQCAKINTPRVLLPWFEKINVNFTFEIIEGGCYSWSLSRD
DIIDLEPLYEDTWGHCSHAARVSVSKSCIPPGSVIILAEEVNTGEILRGDVNVDKISSLK
VMSTTWKLYLEEAPEAFEVFAYDESGNKFSTLEGLSFKWSIENIGSTVGEDNLVTLVRWR
DTDYEAPPGITELEAVGLRSYSVLLYGQAMGECLVTVCLDNICTDFRLHVVASVVLTPAT
AIVTPGDTLRYKVVRARAGRLTIQDISETLYYLTVPDTSIARLEDSISLVRANEIGATTV
YLLSGSTEVATATLTVAESHSIKVTVRPSKMVISGEPFIIHCILLDEYGHAITAGEEVSI
KLNVDGEANVELLKSTQNGTITDAVAQNAGQFTVKAVLHSVAGKLLMRKVEGQAIATAID
PLEIVPPEVFVAWTDTIQEVQLRHHGGGDEPVVWSEVETTTDGDLSLTDSGKVRVRGLGE
MSVRVQLKNYPHVRAVGKVYSTVPELLRVSSTGHARVGRPHHLHVALTATHPATGQLHNY
NVCNCESFAVTLLEGPEPHNVTAAPWIQPEEGACCVLECVWASRGVSALRVSRGRAGDTA
RVALRAAPRVLWPARAAAVLGATLPVIAEGESLSAHSSETRIAEISSRRGVAPSKYPDAQ
LFTFSCRRKGEARLAVVSQTEGEQESVELEAACAPHVSRVRLEPPDTPGNCSGARVWLRP
GNEVPLKVTLFDAVGRELLDETGPRVTWETEPYHVGIEYKSTDRLFVETHPEFDPVPVPY
KYYQIVMADEQAVGWSGILRANIPETTASIQARVVAPLKCDPLKVNMAWEGETVGNIARI
SGGSGKYAIEAPKGVSGNVDGALLTLAVPGPGSYDLVVTDLCVMGEKQLVEVAIEEVITV
DVTGPRAIGVGSCMDISAIARGATNRALGSARGPQWRTTGPVIVKDEKLCGLDEGIATVR
AAIAGVWSSELEVVVFPPLEVVPRESRVPLGGRLQLRHRGGPPPHLANILYHTVGTQSYV
EVSPTGSVQGLSKGVAKIKLVATDIANVEMASADAEVEVVPISGVRVQAATQSLVVGAPG
PVWVAARAALGPGALWALQPPPRVLWTLRPPAAARLYATHSDDMLERQAAEGLSVRVVPL
KPGVITIDVRVRNVGQLSDTLSWDGTIEILGIADIRTSVDGVGEISSGQRLAVAVGATVK
LKSTPTSSYRALQDGAFEVTPDGELRGIRPGHGVVVVSHKDERNNIYRENAIHVEVATPH
YCTAEPADEEGSVRVALRSNIGRHLLGPQANVTISSLTYSGTRSVNGNELMISDLEPAGA
FMSFEASIGGVTVRDDVWVTGPDSRTDRIFATGGWGICLDGVGWRADSGVRLHAGGGATL
AVLWRAARARHALRRERPPAALSVQQLCVHKMEFAPGEWPSAMVPLKIEAVGLTSGPLLC
TEDQKYALEGIQVELPFICRTKTPHTAKAVLDIMKGELGCSIIPAYTITEASEVELCAEW
EAARTCTKVMLLPPIKTSHRTVSLLNPPASFTVTGHPHALRLVKLTASPGVKIETRTKDG
EIEVLVKNEASTCGLGFIDVKSRLTAQEIRIDVERECDVACGTLLGALISILRPYLTTLV
TVLAVAVAFLYIQSRIQQKGQIRMPVERPQTSVSSGPGSPPLSRTRTWSRSPYASRGPTA
PVYGDASVLPDQSFSPNSTSMHSTLFGL
NT seq 5127 nt   +upstreamnt  +downstreamnt
atggaaaatataagaaagaccataacttttatatcacttctttgcatttttactaactgt
tgtcagtgtgccaaaataaacacgccaagagtacttctaccatggtttgagaaaataaat
gttaattttacttttgaaatcatagaaggtggctgctattcatggagtctgtctcgtgat
gacatcatagacctcgagcctctttacgaagatacctggggtcattgctcgcatgctgca
cgagtatcagtatctaaatcatgcattccaccggggtctgtcatcatcttggcagaggaa
gttaacacaggcgaaatattgagaggagatgtcaatgttgacaaaataagttctctcaag
gtgatgagtacaacctggaagctttatctggaagaggctcctgaggcctttgaagtattt
gcttatgatgaatcgggaaacaagttttcaactcttgaaggattgagctttaaatggtct
atcgaaaatattggcagcactgttggggaagacaacttagtcacgttagttcgttggcgg
gacacggactatgaagcgccgccaggcatcacagaattagaggctgttggccttcgttct
tactctgtcctgctgtacggccaagccatgggcgaatgtctcgtcaccgtctgtcttgac
aatatctgtacggacttcagattgcatgtagtggccagtgttgtgctcactccagctact
gctattgtgacgccgggtgacactttgagatacaaggttgtaagagcacgtgcgggtcga
ctcacaatacaggatatttcagagacactttattatctgacagtgcctgacacaagcata
gcccgactagaagatagcatcagtttggtccgagctaacgaaataggtgccacaactgta
tacctcttatccggttcaacagaagtagctacagctactttgactgtagcggaatcacac
agcataaaagtgaccgtaagaccatccaaaatggtcattagtggagaaccatttattatc
cactgcatacttcttgatgaatacggccatgcaatcacggccggagaggaagtttcgatc
aaactgaatgttgatggtgaagcaaatgtagagctattgaaatctactcaaaacggtaca
ataacggatgcggttgcccaaaacgctgggcagtttacggtgaaagcagttcttcattcg
gttgctgggaaattgttgatgcgaaaggttgaaggtcaggcgatagctacagccatagat
cccttggagattgtaccacctgaagttttcgtcgcttggactgacacaatacaagaagtg
cagttacgccaccatggaggtggagacgagcccgtggtgtggtcagaagtggagactacc
actgatggagatctctctctgactgactcgggcaaagtaagggtccgaggtctgggcgag
atgtcagtgagagtgcaattgaagaattacccacatgtgcgggctgttggaaaagtgtac
tcgactgttcctgaactattgcgagtgtcaagtaccgggcacgctcgcgtgggtcgcccg
caccacttgcacgtcgccctcactgccacccaccccgccactggacagctacataactac
aatgtatgtaactgcgagtctttcgccgtgacgctgcttgaaggacccgagcctcataac
gtgacggcagctccttggatacaaccagaagagggtgcgtgctgcgtgctggaatgcgtg
tgggcgtcgcgcggcgtgtccgcgctgcgcgtgtcgcgcgggcgcgcgggcgacacggcg
cgcgtggcgctgcgggccgcgccgcgcgtgctgtggcccgcgcgcgccgccgccgtgctg
ggcgccacgctgccggtgatagcagaaggcgagtccttatcggcacactcgtccgaaact
agaatagctgagatttccagtcgacgcggggtagcgcctagcaaatatcctgatgcacag
ttgtttaccttctcatgtcgaaggaaaggcgaagcccggctagctgtggtctctcaaacg
gaaggcgagcaagagtcagtagagctggaggcggcgtgcgctccacacgtgtctcgcgtg
cggctcgagcctcccgacacgcccgggaactgctcgggagccagagtttggcttcgaccc
ggaaatgaagtaccactgaaagtgaccctattcgacgcggtaggcagagagctgttagac
gaaaccgggccacgagtgacatgggagactgaaccttatcacgtgggaatagagtacaag
tctaccgacagactctttgtggaaacgcatcctgaattcgatccagtacccgtaccatat
aaatattaccagattgtaatggccgacgagcaggctgtaggttggagcggcatcctccga
gcgaacattccagaaaccaccgccagcatacaagcgcgcgttgttgcgccactcaaatgt
gacccgctaaaggtgaacatggcatgggagggcgagaccgttggcaacattgctcgcata
tctggcggtagcgggaaatacgctatagaagcccctaaaggggtctcagggaatgtagac
ggagccctacttactttagctgtgccgggcccggggtcctatgacttagtagtgacggac
ttgtgtgtgatgggcgagaagcaacttgtcgaggttgctatagaagaggtcataacagtc
gacgtgaccggacctcgtgctatcggcgttggttcctgcatggatatcagtgcaatcgct
cgcggggccaccaacagagccctgggctcggcccggggcccccagtggaggaccacaggg
cctgtgattgtgaaggatgagaaattgtgcgggctcgatgaaggaatagcgacggttaga
gcggcgatcgctggcgtttggagttcggaacttgaggtggtagttttccctcccctggaa
gtggttccccgcgaatcccgggtgcctctcggcggacgtctccaacttcgacaccgcgga
ggaccgccgccgcacctcgccaacattctctaccacactgttggtactcagagctatgtc
gaggtgtcgcctaccggttccgtccaggggctttcgaaaggcgtcgcgaagatcaaattg
gtcgctacagacatcgccaacgtggagatggcttcggctgatgctgaagtggaggtggtg
ccgatatccggcgttcgggtccaagcggccacgcagagcctggtggtgggcgcgccgggc
ccggtgtgggtggcggcgcgcgcggcgctgggcccgggcgcgctgtgggcgctgcagccg
ccgccgcgcgtgctgtggacgctgcgcccgcccgccgccgcgcgcctctacgccacgcac
agcgacgatatgctcgagagacaggccgctgaaggtttgtcggtgcgagtggtacctctg
aagcccggtgttattacgatagatgtcagagtcaggaatgtgggacagctatccgacacc
ctctcctgggacggtactatcgaaatactcggcatagccgacattcgcacatcagttgat
ggagtcggcgaaatatcatctggccaacgtttggccgtcgccgtgggagcgacggtcaaa
ttgaagagtacaccgacatcaagttacagggcattacaagatggcgcctttgaagtcacg
cccgatggagaattgagaggaataagacccgggcatggagtggttgttgttagtcataag
gatgagaggaataatatctatagggagaatgcgatccatgtagaagtggcgactccccac
tactgcacagcggagccagcagacgaggaaggctcagttcgcgtggctctccgctccaat
atcggcagacatttactcggaccgcaagccaatgtcaccatatcctcactcacttacagt
ggtactcgaagtgtaaacggaaacgaattgatgatatcggacctggagcccgccggtgct
ttcatgagtttcgaagcttccatcggcggcgttacagtccgtgacgacgtgtgggtcact
ggcccagattcccgcactgatagaatattcgcgaccggcggctggggtatttgcctggac
ggcgtgggctggcgggcggacagcggcgtgcggctgcacgcgggcggcggcgccacgctg
gccgtgctgtggcgcgccgcccgcgcccgccacgcgctgcgccgcgagcgcccgcccgcc
gcgctcagcgtgcagcagctgtgtgtgcacaagatggaattcgcgccaggtgaatggcca
tcggccatggtgcctctcaagatagaagcggttggtttaacatcaggacctttattgtgt
accgaagaccagaagtatgcattggagggcattcaagtggaactgccgtttatttgcaga
accaaaacaccgcatacggctaaagctgtcttggatatcatgaagggtgaactcggttgt
tctataattcccgcctacacgataacagaagcttccgaagtggaattgtgcgcggagtgg
gaagcggcgcgaacttgcaccaaagttatgttgctgcctccgatcaaaacctctcatagg
actgtgtcgttgttgaatccacccgcttctttcactgtcacaggtcacccccatgcccta
agactggtcaaactaaccgcttcaccaggcgtcaagatcgaaacgcgaacaaaagacgga
gagattgaagttctagtcaagaatgaagcgtcgacctgcggcctagggttcatagacgtt
aaatctagactcacagctcaagaaataaggatagacgtcgaaagagaatgcgacgtggca
tgtgggactttgcttggggctctaatatcaattttgaggccatatttgacaacattagtg
acggtcttggctgttgcggtggcgtttttgtacattcaatcccgcatccagcagaaaggc
cagatccgcatgccggtggagcgtccccaaacatccgtatcatcagggccgggctccccg
cctctgtcgcggacgcgcacgtggtctcgcagcccgtacgcgagtcgaggcccgacggcc
cccgtgtatggcgatgccagtgtactgccagatcaaagcttctcgccaaactcaacaagc
atgcattcaactttgtttggattatag

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