Agelaius tricolor (tricolored blackbird): 139584853
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Entry
139584853 CDS
T10815
Symbol
OTOF
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
Membrane trafficking [BR:
atrc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
139584853 (OTOF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139584853
NCBI-ProteinID:
XP_071273259
LinkDB
All DBs
Position
Unknown
AA seq
2048 aa
AA seq
DB search
MALVLQLRSVSGLRGKGDRIAKAAFRGLSFYTRVLENCEDEAKFDETFRWPVATNIDGNE
ILEIQVFNYSKVFTNRLIGTFRMVLQKVVVEGQLEVTDTLIDDNNSAIQTSISIEIRYQA
LDGTVGTWNDKEFLETPSVHSEGDGRYSLETDSLLSGHRHSSDVPPGKSNQQSTERSFRR
MEEDELYFHSEDELLGEGDSLSQGSLDTRAGKGVFSAMKLGKTRPSKDEHRKQDDPAVLE
TEDLDRKAMRYGAGLEPDTISLASVTAVTTNVSNKRSKPDIRMEPSAGRPMDYQVSITII
EARQLVGLNMDPVVCVEVGEEKKYTSMKESTNCPYYNEYFVFDFHVPPDVMFDKIIKLSV
IHSKNLLRSGTLVGSFKMDVGTVYTQPEHQFYHKWAILSDPEDLTAGLKGYLKCDIAVVG
KGDNIKTPHKANETEEDDIEGNLLLPDGVPPERQWARFYVKIYRAEGLPRMNTSIMANVK
KALIGENKDLVDPYVQVAFAGQKGKTSIQKSSYEPLWNEQIIFTEMFPPLCKRIKIQIRD
SDKVNDVAIGTHFIDLRKVSNEGDKGFLPTFGPAWVNMYGSTRNYTLMDEHQELNEGLGE
GVSFRARLLLGLAVEILDTTNPEINSSTEVQVEQATAVADNCSGKMEEFFLFGAFLEATM
IDRKIGDKPINFEVTIGNYGNQVDGSSKPLLRRKKEGGDGDEEESELLQNSSDDEVGEDG
ELVSVSSSQPMKPLVTDRNYFHLPYLEKKPCIYIRSWWQDQRRRLYNANIMDKIADKLEE
GLNDVQEMIKTEKPHPERRLRGVLEELSSGCLRFLSLADKDQHHSSRTRLDRERLKSCMR
ELENMAQQATALRSQIKRNTMKDKLKLVQNFLQKLRFLADEPQHTIPDVFIWMMSNNKRI
AYARIPSKDILYSIVDEEMGKDCAKVKTVFLKLPGKRGFGPAGWTVQAKMEIYLWLGLNK
QRKDFLSGLPCGFEEKKTPRGQNLPSFPPISLLYTKKQVFQLRAHMYQARSLFAADSSGL
SDPFARVFFISQSQCTEVLNETLCPTWDQLLVFDNVELYGEAHEMRDDPPIIVIEIYDQD
TVGKADFMGRTFAKPVVKMSDEEYCPPRFPPQLEYYQIYRGNATAGDLLAAFELLQIGPG
GKSDLPPIDGPTDMDRGPILPVPLGIRPVLSRYRVEILFWGLRDLKRVNLAQVDRPRVDI
ECAGKGVQSALIQNYKKNPNFSTLVKWFEVDLPENELLHPPLNIRVVDCRAFGRYTLVGS
HTVSSLRKFIYRPPDKKAQQWNMAAKHLNGYLAMTSRAHRSRPTGEIVVNMEPEVPIKKM
DTMVKLEANSDAVVKVDVTEEEKEKKKKKKKGGGGGGGGGGGEEVEEEEPDESMLDWWSK
YFASIETMKEQLRQQEAAAAEAEEKEEMEVGEGSKAQVKNKDKDKDKDKSKAPKDDKKKK
QQPVPELPEKKNKQKIDELKVFNKELESEFDNFEDWLHTFNLLRGKIGDNDDNATEEERI
VGRFKGSMCVYKVPLPDDISKEAGYDPTFGMFQGIPSNDPINVLVRVYIVRATDLHPADI
NGKADPYIAIKLGKTDIKDKENYISKQLNPVFGKSFDIEATFPMESMLTVAVYDWDLVGT
DDLIGETKIDLENRFYSKHRATCGVSQTYSIHGYNTWRDPMKPSQILSKLCKEGKVDGPH
FGPGGRVKVANRVFTGPTEIEDENGQKKPTDEHLALAVLRHWEDIPRAGCRLVPEHVETR
PLLNPDKPGIEQGRLEMWVDMFPMDMPAPGPAIDISPRKPKKYELRVIVWNTDEVILEDD
DYFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRYIFPFDYLMAEEKIVIS
KKESMFSWDETEYKIPARLTLQVWDADHFSADDFLGAIELDLNRFPRGAKTSKQCSLEMV
TNEAELPMISIFKQKRVKGWWPFVARDENDELEITGKVEAELHLLTAEEAEKSPAGLARN
EPDPLEKPNRPDTSFIWFLNPLKSIKYLICTRYKWLIIKIVLALLLLIMVALFLYSMPGY
MVKKLLGA
NT seq
6147 nt
NT seq
+upstream
nt +downstream
nt
atggctctggtgctgcagctccgctccgtctccggcctccgcggcaaaggcgaccgcatc
gccaaggcggcgttccggggactttccttctacacccgagtgctggaaaactgcgaggat
gaggccaagtttgacgagactttccgctggccggtggcgaccaacatcgacgggaatgag
atcctggagatccaggtgttcaactacagcaaagtcttcaccaacaggctcattgggacg
ttccggatggtgctgcagaaggtggtggtggaagggcagctggaggtgacggacacgctc
atcgatgacaacaattccgccatccagaccagcatctccatagagatccgctaccaggct
ctggatgggacggtgggcacctggaatgacaaggaattcctggagacgcccagcgtgcac
tcggagggggacgggaggtattccctggagaccgacagcctcctgtccggccaccggcac
agctccgatgtccctcccgggaaatccaaccagcaatccacggagaggagcttcaggagg
atggaagaggacgagctgtatttccacagcgaggatgagctcctgggagagggggattcc
ctgagccaggggtccctggacacgagagctggcaaaggagttttttcagccatgaagctt
ggaaagacgcgtccgtccaaggatgagcatcggaaacaagatgatccggccgttctggaa
acggaagacctggatagaaaggccatgagatacggggcaggcctggagccagacaccatc
tccctggcctctgtcaccgctgtcaccaccaatgtctccaacaaaaggtccaagcccgac
atcaggatggagccgagtgccgggaggcccatggattaccaggtcagcatcaccatcatc
gaggcccggcagctggtggggctcaacatggaccccgtggtgtgtgtggaggtgggggag
gagaagaaatacacatccatgaaggaatccaccaattgtccttactacaacgagtatttc
gtcttcgatttccacgtcccccccgacgtcatgttcgacaagatcatcaagctctccgtg
atccactccaaaaacctcctgaggagcgggacattggtggggtccttcaagatggatgtt
gggaccgtttatacccagcctgagcaccagttctaccacaaatgggccatcctgtccgac
cccgaggacctcacagccggcctcaagggctacctcaagtgtgacatcgccgtggtgggc
aaaggggacaacatcaagaccccgcacaaggccaacgagacggaggaggacgacatcgag
gggaacctcctgctccccgacggggtccccccggagcggcagtgggctcggttctacgtc
aagatctaccgcgccgaggggctgccgcgcatgaacaccagcatcatggccaacgtcaag
aaggcgctcatcggcgagaacaaggacctggtggacccctacgtgcaggtggccttcgcg
gggcagaagggaaagacgtccatacagaagagcagctacgagcccctctggaacgagcaa
atcatcttcacggagatgtttcccccgctgtgcaagcggatcaagatccagatccgggac
tcggacaaggtcaacgacgtggccatcgggacccacttcatcgacctgaggaaggtctcc
aacgagggggacaaaggtttcctgcccaccttcggccccgcctgggtgaacatgtacggc
tccacgcggaactacaccctcatggacgagcaccaggagctcaacgagggcctgggcgag
ggcgtctccttccgcgcccggctcctgctgggcctggccgtggagatcctggacaccacc
aaccctgagatcaacagctccactgaggtgcaggtggagcaggccacggcggtggctgat
aactgcagcgggaagatggaggaattcttcctctttggagccttcctggaggccaccatg
atcgacaggaagattggggacaaacccattaacttcgaggtcaccataggtaactatggc
aaccaggtggatggctccagcaaacccctcctgaggaggaagaaagagggaggggatggg
gacgaggaggagtcggagctgctccagaattccagtgatgatgaagttggcgaggatgga
gagctggtttccgtttcttcatcccagcccatgaagcccctggtcacggacaggaattac
ttccacctgccctacctggagaagaagccctgcatctacatccggagctggtggcaggac
cagcggcgccggctctacaatgccaacatcatggacaagatcgcggacaagctggaggag
ggcctcaacgacgtgcaggagatgatcaagacggagaagccgcacccggagcgccggctc
cgaggggtcctggaggagctcagcagcggctgcctgcgcttcctgagcttggctgacaag
gaccagcaccactcgtcccgcaccaggctggaccgggagaggctcaaatcctgcatgagg
gagctggagaacatggcccagcaggccacggccctgcgctcccagatcaagaggaacacc
atgaaggacaagctgaagctggtgcagaacttcctgcagaagctgcggttcctggcggat
gagccccagcacacgattcccgacgttttcatctggatgatgagcaacaacaagcgcatc
gcctacgcccgcatcccttccaaggacatcctgtactccatcgtggacgaggagatgggc
aaggactgtgccaaagtgaagacagttttcctcaagcttcccgggaagaggggctttggc
cctgctggctggacggtccaggccaagatggagatctacctgtggctgggcctcaacaag
cagcgcaaggacttcctcagcggcctcccctgtgggttcgaggagaagaaaacaccccga
ggacaaaacctgccctccttcccacccatcagcctcctgtacaccaagaaacaggtgttc
cagctgcgagcccacatgtaccaagccaggagtttgtttgcagccgacagcagtggcctc
tcggacccctttgctcgggtcttcttcatctcccagagccagtgcaccgaggttctcaac
gagaccctgtgcccaacctgggaccagctcctggtgttcgacaacgtggagctgtacggg
gaagctcacgagatgcgggatgacccccccatcatcgtcatcgagatctacgaccaggac
accgtgggaaaagccgacttcatgggccggacgttcgccaagccggtggtgaagatgtcg
gacgaggagtactgcccgccgcgcttcccgccgcagctggaatattaccagatctaccgc
ggcaacgccacggccggggacctgctggccgccttcgagctgctccagatcggccctggg
ggtaaatcagacctgccccccatcgacggccccacggacatggaccgaggtcccatcctg
ccggtgcctctgggaattcggccggtgctgagcagatacagagtggagatcttgttctgg
gggctcagggacctgaagagagtgaacctggcccaggtggacagaccccgtgtggacatc
gagtgtgctgggaagggcgtccagtctgccctgatccagaactacaagaaaaaccccaac
ttcagcactttggtcaagtggttcgaggtggaccttcctgagaacgagctgctgcacccg
cccctgaacatccgcgtggtcgactgccgcgccttcggccgctacaccctggtgggctct
cacaccgtcagctccctccgcaagttcatctaccgcccgcccgacaagaaagcccagcag
tggaacatggcagccaaacacctcaacggctacctggccatgaccagcagggcccaccgc
tctcgccccacaggggagatcgtggtcaacatggaacccgaggtccccatcaagaagatg
gacacgatggtgaagctggaagctaattccgacgcagtggtgaaggtggatgtgaccgag
gaagagaaggagaaaaagaagaagaagaagaaaggaggaggaggaggaggaggaggagga
ggcggggaggaagtggaggaggaggagccggacgagagcatgttggactggtggtccaag
tacttcgcttccatcgagacaatgaaggagcaactccggcagcaggaagcggccgcggca
gaagcagaggagaaggaggagatggaggttggagagggctctaaggcccaggtgaagaac
aaggacaaggacaaggacaaagacaagtccaaggcacccaaagatgacaagaaaaagaag
cagcagccagtccctgagctccccgagaagaagaacaagcagaagattgatgaactcaag
gtcttcaacaaagagctggaatcagagtttgacaactttgaggattggctgcacaccttc
aacctgctccgggggaagattggggacaacgacgacaacgccacggaggaggagcggatc
gtggggaggttcaagggctccatgtgtgtctacaaagtgccgctccccgacgacatcagc
aaggaggcagggtatgaccccactttcgggatgttccaggggatccccagcaacgacccc
atcaacgtgctggtccgagtctacatcgtgcgggccacggacctccacccagctgacatc
aacgggaaggccgacccctacatcgccatcaagctgggcaagacggacatcaaggacaag
gagaactacatctccaagcagctgaaccctgtttttgggaaatccttcgacatcgaggcc
accttccccatggagtccatgctgaccgtggctgtgtacgactgggacttggtgggcact
gatgacctcattggggagaccaagatcgacctggagaatcgcttctacagcaagcaccgg
gctacctgcggcgtgtcccagacctactccattcatgggtacaacacctggcgtgacccc
atgaagccctcccaaatcctgtccaagctgtgcaaagaggggaaagtggatgggccgcac
tttgggccggggggaagagtgaaagttgccaacagggtcttcaccggccccacggagatc
gaggatgaaaatggccagaagaagcccacggacgagcacctggcgctggcggtgctgcgg
cactgggaggacatcccgcgggccggctgccgcctcgtccccgagcacgtggagacgcgg
ccgctgctcaaccccgacaagccgggcatcgagcagggccgcctggagatgtgggtggac
atgttccccatggacatgccagcgcccggccctgccatcgatatttctcccaggaaacca
aagaagtacgagctcagggtgatcgtgtggaacacggacgaggtcatcctggaggacgac
gactacttcaccggggagaaatccagtgacatttttgtcagggggtggctgaaggggcag
caggaggacaagcaggacacggatgtccattaccactccctcactggtgaaggcaacttc
aactggcgctacatcttccccttcgactacctgatggccgaggagaagatcgtcatctcc
aagaaggagtccatgttctcctgggatgagactgagtacaagatcccggcccgcctcacc
ctgcaggtctgggacgccgaccacttctcggctgatgatttcctgggggccatcgagctg
gacctgaaccgcttcccccggggagccaagacatccaagcagtgcagcctggagatggtg
accaacgaggctgagctgcccatgatctccatcttcaagcagaagcgggtcaagggctgg
tggcccttcgtggccagagatgagaacgacgagctggagatcactggcaaggttgaggct
gagctgcaccttctgacagcggaggaggccgagaaatcgcctgctgggctggctcggaat
gagcctgatcccctggagaaacccaaccgcccggacacatcgttcatctggttcctgaac
ccgctcaagtccatcaaatacctcatctgcacccgctacaagtggctcatcatcaagatc
gtgctggccctgctgctcctcatcatggtggccctgttcctctacagcatgcccggatac
atggtcaagaagctgctgggagcatga
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integrated database retrieval system
