Agelaius tricolor (tricolored blackbird): 139585066
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Entry
139585066 CDS
T10815
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc00310
Lysine degradation
atrc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
139585066 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atrc03036
]
139585066 (SETDB1)
Enzymes [BR:
atrc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
139585066 (SETDB1)
Chromosome and associated proteins [BR:
atrc03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
139585066 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
139585066 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
MBD
Pre-SET
SET
Chromo_MORC2_6th
DUF4537
YkyA
Motif
Other DBs
NCBI-GeneID:
139585066
NCBI-ProteinID:
XP_071273580
LinkDB
All DBs
Position
Unknown
AA seq
1344 aa
AA seq
DB search
MDCQDIKELQQEVMEELGISMEELREIIDKEVENSEWVRQRKQQLEELEQCMRHKEEEVA
HVDQLIDDAVRAMDKCEVLAKELYSMMGLQYRDSSSEDEAPAATEVIEIPDEEDDDDVMS
VDPSWKRSSSCPRISRDQSLLREAMAAMRKSARDVAKFMDAVNKKTNLQEAQKDAQPPQE
PPGTAQPVPVPAAPSNDLNTDGDLKVGMRILGKKRTKTWHKGTLIAIQTVGAGKKYKVKF
DNKGKSLLSGNHIAYDYHPSAERHHVGRRVVARYKDGNQMWLYAGIVAETPNVKNKDRFL
IFFDDGYASYVKEWELYPVCRPLKKAWEDIEDVSCRDFIEEYITAYPNRPMVLLKNGQLI
KTEWEGTWWKSRVEEVDGSLVKILFLEALPMGTSSVSFSFPQEDRRCEWIYRGSTRLEPM
FSMKTSTASTQEKKQSGQTRTRPNVGAVRSKGPVVQYTQDLAGAGPQYKTPEPAARPTSP
QPAEMECSDTQLAQGRKQVAKKSTSFRPGSVGSGHSSPSSPVLGDTPAAGRALPAPQHRV
PSSAVPSSAPSQPFHGMLDRVPTEPSYRAPLEKLFYLPHVCSYACLARVRPVRGDQYRSR
NPLLIPLLYDFRRMTARRRVNRKMGFHVLYKTPCGLCLRSMHEIERYLFETDCDFLFLEM
FCLDPYVLVDRKFQPYKPYYYIADITKGKEDVPLSCVNEIDNTPPPQVAYSKERIPGKGV
YINTSWEFLVGCDCKDGCRDKSRCACHQLTIQASGCTPGGQINPNSGYQHKRLEECLPTG
VYECNKRCKCNVNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKIL
TDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDAKCSSDNSGVDLKDDDDDEENTGT
EELEESNEDSSDDNFCKDESFSTSSVLRSYATRRQTRGQRDHGASETASKDSGLTRALGH
EETSTAPLCKLPVSEEMSQSKVASWLSSNRVAESLQDSDGASSFRGGEGGEAKAVKMEMP
AEREKGCASTLPGDLNGEAKAPKKEEPEESTKIPGLSSLGRRYGYNPCPPRLEGIRRPLS
GTVLLQSRRRSLPPPPPSENVLMVSSSTDSDEEHRAGQAPGAANDSDDIQTISSGSEEEE
GEDKKNPSSGSAGPVKRQVAVKSTRGFALKSTHGIAIKSTPLAAADKGESAGPVRRSTRQ
FYDGEENCYIIDAKLEGNLGRYLNEDPSWHGADLGLQLRGRQRGGQGAAVLLRGHRLPGP
PALSRPRSLPAAPPPPAAPFFPSVRVKFLLQRFSALPFVSWKITDGHGAGMDSGCAGGDF
HPLGFLPLCKGSSYPTRQWVPFEE
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atggattgccaggacatcaaggagctgcagcaggaggtgatggaggagctgggaatctcc
atggaggagctgcgggaaatcatcgacaaagaagtggagaattccgagtgggtgaggcag
aggaagcagcagctggaggagctggagcagtgcatgaggcacaaggaggaggaggtggca
cacgttgaccagcttattgatgatgctgtgagggccatggacaagtgcgaggtgctggcc
aaggagctgtactccatgatgggcctgcagtaccgggacagcagctcggaggacgaggct
ccggcggccaccgaagtgatcgagatccccgacgaggaggatgatgatgatgtcatgagc
gtggacccgagctggaaacgcagcagcagctgtcccagaatctccagggatcagagcctg
ctgagggaagcaatggctgccatgaggaaatctgcccgggatgttgcgaaattcatggat
gctgtaaacaagaaaaccaacttgcaggaagcacagaaagatgcacaaccccctcaggaa
cctcctggcactgcccagcccgtccctgtccctgcagcccctagcaatgatctcaacact
gatggggacctcaaagtgggcatgaggattttggggaaaaaaagaaccaagacgtggcac
aaggggacgttgattgccatccagacggttggtgctggcaagaaatacaaagtgaaattt
gataacaaaggaaagagtttgctctcgggcaaccacattgcctacgattaccacccctct
gctgagaggcaccacgtgggcaggagggtggtggccaggtacaaggatggcaatcagatg
tggctctatgctgggatcgtggctgaaacccccaatgtcaagaataaagacaggttcctg
attttcttcgacgatggttacgcgtcctacgtgaaggagtgggagctgtacccggtgtgc
cggcccctgaaaaaagcctgggaagacattgaggatgtttcctgtcgggatttcattgag
gaatacatcacagcctaccccaaccgacccatggtgctgctgaagaatgggcagctgatc
aaaaccgagtgggaaggcacctggtggaaatccagagtggaagaagtggatggaagtctg
gtgaaaatccttttcctggaagctcttcccatgggaacttcaagtgtttccttctctttc
ccacaagaggacagacgctgtgagtggatttaccgaggttccacacgcctcgagcccatg
ttcagcatgaaaacttccacagcttccacccaggaaaagaagcagagtgggcaaaccagg
actcgtcccaacgttggtgctgtgaggagcaagggccctgtggtccagtacacccaagat
ttagcaggagctggtccccagtacaagactccagagccagctgcacgtcccacgtctcct
cagcctgcagagatggagtgctccgacacccagctggcgcagggcaggaagcaggtggcc
aagaaaagcacctccttccgccctggctccgtgggctccggccactcgtccccatcctcg
cctgtcctcggggacaccccggcagccgggagggccctcccggccccgcagcaccgcgtc
cccagcagcgctgtccccagcagcgccccgtcccagcccttccacggcatgctggaccgc
gttcccaccgagccgtcctaccgagcccctctggagaagctcttctacctcccccacgtg
tgcagctacgcctgcctggcgcgggtgcggccggtgcgcggcgatcagtaccgcagccgc
aacccgctgctcatcccgctgctctacgacttccgccgcatgacggcgcggcgccgcgtc
aaccgcaagatgggcttccacgtgctctacaagacgccctgcgggctctgcctgcgctcc
atgcacgagatcgagcgctacctcttcgagacggactgcgacttcttgttcctggagatg
ttctgcctggatccctacgtgctggtggatcgcaagttccagccctacaagccgtactac
tacatcgccgatatcaccaagggcaaggaggacgtgcccctgtcgtgcgtcaacgagatc
gacaacacgccgccgccgcaggtggcttacagcaaggagaggatccctgggaaaggggtg
tacatcaacaccagctgggagttcctcgtgggctgtgactgcaaggatggctgcagggac
aaatccaggtgtgcctgtcaccagctgaccatccaggccagtggctgcacccccgggggg
caaatcaaccccaactcaggctaccagcacaagcggctggaggaatgtcttccaacaggt
gtttatgagtgcaacaagaggtgcaagtgcaacgtgaacatgtgcaccaaccgcctggtc
cagcacggcctccaggtgcggctgcagctcttcaagacccagaacaaaggttggggcatt
cgctgcctcgacgacatcgccaagggctcctttgtctgcatctacgcagggaaaatcctg
acagatgactttgctgacaaagaggggctggagatgggtgacgagtactttgccaacctg
gaccacatcgagagcgtggagaacttcaaggagggctacgagagcgacgccaagtgctcc
tcggacaacagcggcgtggacctcaaggacgacgacgacgacgaggagaacacgggcacg
gaggagctggaggagtccaacgaggacagctccgatgacaatttctgcaaggacgagagc
ttcagcaccagctcggtgctgcgcagctacgccacgcggcggcagacgcgcggccagcgc
gaccacggcgcctcggaaacggcctccaaggactcggggctcacccgggccctcggccat
gaggaaacctccacagcccccctgtgcaagctgcccgtgtctgaggagatgtcccagagc
aaagtggcctcgtggttgagctccaacagggtggctgagagcctgcaggacagcgatggc
gcctcgtccttcagggggggtgaagggggagaagccaaggctgtgaagatggagatgcct
gcagagagggagaagggctgtgcttccacgcttccaggagatctgaatggagaggcaaag
gcacccaagaaggaggaacctgaagaatcaaccaaaattcccgggctgagcagcctgggc
aggaggtacggctacaacccctgtccccccaggctggaggggatccgcaggcccctcagt
ggcacggtgctgctgcagagccgccggcgatcgctgcccccgccgcccccctccgagaat
gtgctgatggtgtcgagcagcaccgacagcgacgaggagcacagggcagggcaggccccg
ggcgcagccaacgacagcgacgacatccagaccatttcctcgggatctgaggaggaggaa
ggggaggacaagaaaaatccatcatctgggtcagcaggtcctgtcaagagacaggtggcc
gtgaaatccacgcgaggcttcgccctgaaatccacgcacggcatcgccatcaaatccacg
ccgctggcggcggccgacaagggcgagagcgcggggccggtgcggcgcagcacgcggcag
ttctacgatggggaggagaactgctacatcatcgacgccaagctggagggcaacctgggc
cgctacctcaacgaggatccgagctggcacggagctgacctgggattacaactacgaggt
cggcagcgtggagggcaaggagctgctgtgctgctgcggggccatcgactgccggggccg
cctgctctgagccggccccgctccctcccagcagctccccctcctcctgctgctcccttt
ttcccctcagtgagggtgaagtttcttctccagaggttctcagctctcccttttgtcagc
tggaaaatcacagatggacacggagcaggaatggactcgggttgtgctgggggcgatttc
caccccctgggtttcctcccactttgcaaaggctccagttatcccacaagacaatgggtt
cccttcgaggaatga
DBGET
integrated database retrieval system
