Agelaius tricolor (tricolored blackbird): 139587384
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Entry
139587384 CDS
T10815
Symbol
PSEN2
Name
(RefSeq) presenilin-2 isoform X1
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139587384 (PSEN2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atrc01002
]
139587384 (PSEN2)
Peptidases and inhibitors [BR:
atrc01002
]
Aspartic peptidases
Family A22: presenilin family
139587384 (PSEN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
139587384
NCBI-ProteinID:
XP_071277758
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MTAFMNNSDSEEEPCNERTSLMSAESPPVPSYQHGLPASEAGQAQAHRKRRAGSSCGPTN
IAGGETSGSGVAVRESILENEEEELTLKYGAKHVIMLFVPVTLCMIVVVATIKSVRFYTE
KNGQLIYTPFSEDTPSVGQRLLNSVLNTIVMISVIIVMTVFLVLLYKYRCYKFIHGWLIL
SSLMLLFLFTYIYLGEVLKTYNVAMDYPTLFIVIWNFGAVGMICIHWKGPLQLQQAYLIM
ISALMALVFIKYLPEWSAWVILGAISIYDLMAVLCPKGPLRMLVETAQERNEPIFPALIY
SSAMMWTVGMAKPDTAARGASQQTWDAAEDGRKQLRSPSHAESQMSETTSPVPTRPVTSS
EELEEEERGVKLGLGDFIFYSVLVGKAAATASGDWNTTLACFVAILIGLCLTLLLLAVFK
KALPALPISITFGLIFYFSTDNLVRPFMDTLASHQLYI
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgttcatgaacaattcggacagcgaggaggagccctgcaatgagagaacatcc
ctgatgtctgcagagagccctcctgttccctcctaccagcatggcctgccagcctcagag
gcagggcaagcacaggcacacaggaagaggcgagcaggcagcagctgtggcccaaccaat
attgccggtggagaaacgtcgggctcgggtgttgcagtgagagaaagcatcctggaaaat
gaagaggaggaactgactctgaaatatggagcaaagcatgtgatcatgctctttgtgcct
gtcaccctttgtatgattgttgttgtcgccaccatcaagtcggtgcgcttctatacggag
aaaaacgggcagctgatctacacccctttcagcgaggacaccccatctgtgggccagcgt
ctcttgaactcggtgctgaacaccattgtaatgatcagtgtcatcattgtcatgactgtg
ttcctggtgctgctctataaatatcgctgctacaagttcatccatggctggctgatcctg
tcctccctgatgctgctcttcctctttacctacatttacctcggggaagtattgaagact
tacaacgtggccatggattatcccactttgttcatagtcatctggaattttggagctgtt
ggaatgatttgcatccactggaaaggtcccttgcagctccagcaagcttatctcattatg
atcagtgctctaatggcattggtgttcattaaatatctacctgagtggtcagcatgggtg
attctaggtgcaatctccatctatgatctgatggctgttctgtgtcccaaggggccactg
agaatgttggtagaaactgcacaggagagaaatgagcccattttccctgcattaatctat
tcctctgctatgatgtggacagttggaatggcaaagccagacacagcagcaagaggagca
agtcagcagacatgggatgcagctgaggatggcagaaaacagctcaggagcccttctcat
gcagagtctcagatgtcagagacgacgagtcctgttccaacccgccccgtcacttcttca
gaggagctcgaggaggaggaaaggggtgtgaagctgggccttggagacttcatattttac
agcgtgcttgttgggaaagcagctgccacagcaagtggggactggaataccacactggcc
tgctttgtagccattctcataggtttatgcctaacacttttactactggctgtttttaag
aaagcactgcctgctctccccatctccatcacctttggcttgatcttctacttctcgaca
gacaaccttgtgcgaccgttcatggacaccctggcctcccaccagctgtatatttag
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