Agelaius tricolor (tricolored blackbird): 139587923
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Entry
139587923 CDS
T10815
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
139587923 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atrc03400
]
139587923 (TDG)
Enzymes [BR:
atrc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
139587923 (TDG)
DNA repair and recombination proteins [BR:
atrc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
139587923 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
139587923
NCBI-ProteinID:
XP_071278743
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MPPARGGRGPALRPHWPAWSRERRARQVIGIVGGAGGDPGDSDGAVGRARHGGPGAGQMM
TAVPNMEMMTEQPTLEGIPEPNIAQEPPKEVKKGGRKRKAKATEPKQPKKPAVKKEKPAK
SKGKQEKITDTFKVKRKVDRFNGVSEAELLTKTLPDILTFDLDIVIIGINPGLMAAYKGH
HYPGPGNHFWKCLFMSGLSNEQLNHMDDHTLPHKYGIGFTNMVERTTPGSKDLSSKEFRE
GGRILMQKLQKYKPRIAAFNGKCIYEIFSKEVFGIKVKNLEFGLQPHKVPDTETLCYVMP
SSSARCAQFPRAQDKVHYYIKLKDLRDQLKGIAPNMEVQEVQYTFDLQLAQEDAKKMAVK
EEKYDPGYEAAYGGAYCDRTLYDTDQCSLSSNGTAGCNPQYCKGLSFSEVPNGQWMTQSF
ADQIPEFNAGMTQEEEGSSV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgcccccggcccggggcggccgcggccccgccctgcgcccccattggccggcgtggtca
cgtgagcggcgcgcccggcaggtcattgggatcgtggggggagccggcggcgaccctggc
gacagtgacggggccgtcgggcgcgcccggcatggagggcccggagctgggcagatgatg
actgcagtgcccaacatggaaatgatgactgagcagccaactctagagggcattccagag
ccaaacattgctcaggagcctccaaaagaagttaaaaaagggggaaggaaaagaaaagcc
aaagcaactgagccaaagcaacccaaaaagcctgctgttaaaaaagaaaaaccagccaag
tcaaaaggcaaacaagaaaagatcacagatacttttaaagtcaaaagaaaagtggaccgt
tttaatggtgtatctgaagctgaacttctgaccaagactttgcctgatattttgaccttt
gatctggatattgtaataattggcataaaccctggcctgatggcagcttacaaaggacat
cattacccaggacctggaaaccatttttggaagtgtctgttcatgtctggtctaagtaat
gaacagctgaaccacatggatgaccacaccttgccacataaatatgggattggatttaca
aacatggttgaaaggacaacacctggaagcaaagacctctccagcaaagagtttcgggaa
ggagggagaattctgatgcagaagctacaaaagtataaacctcgtatagcagcttttaat
ggaaaatgtatttatgaaatttttagtaaagaagtttttggaattaaagttaagaacttg
gaatttgggctgcagccacacaaagtgccagatacagaaactctctgctacgttatgcca
tcttccagtgcaagatgtgctcagtttcctcgggcacaagataaagtccattattacatt
aagctgaaagacttaagggatcaactgaaaggcatcgcacccaacatggaggtccaggaa
gtgcagtacacatttgacttgcaacttgcacaagaggatgctaaaaagatggctgtcaaa
gaagaaaagtatgacccaggctatgaagcagcgtatggaggagcttactgtgaccgtacg
ctgtatgacactgaccagtgcagcttgtcttcaaatggaactgcaggatgcaatccacag
tactgcaaagggttgtccttcagtgaggttcctaatggacagtggatgacacagtccttt
gcagaccagattccagagttcaatgctggcatgacacaggaagaagagggaagcagcgtg
tag
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