KEGG   Agelaius tricolor (tricolored blackbird): 139588058
Entry
139588058         CDS       T10815                                 
Symbol
RBX1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
atrc  Agelaius tricolor (tricolored blackbird)
Pathway
atrc03420  Nucleotide excision repair
atrc04110  Cell cycle
atrc04114  Oocyte meiosis
atrc04120  Ubiquitin mediated proteolysis
atrc04141  Protein processing in endoplasmic reticulum
atrc04310  Wnt signaling pathway
atrc04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:atrc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    139588058 (RBX1)
   04120 Ubiquitin mediated proteolysis
    139588058 (RBX1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    139588058 (RBX1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    139588058 (RBX1)
   04350 TGF-beta signaling pathway
    139588058 (RBX1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    139588058 (RBX1)
   04114 Oocyte meiosis
    139588058 (RBX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:atrc04121]
    139588058 (RBX1)
   03400 DNA repair and recombination proteins [BR:atrc03400]
    139588058 (RBX1)
Enzymes [BR:atrc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     139588058 (RBX1)
Ubiquitin system [BR:atrc04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   139588058 (RBX1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     139588058 (RBX1)
   Cul2 complex
     139588058 (RBX1)
   Cul3 complex
     139588058 (RBX1)
   Cul4 complex
     139588058 (RBX1)
   Cul7 complex
     139588058 (RBX1)
   Cul8 complex
     139588058 (RBX1)
   Cul9 complex
     139588058 (RBX1)
DNA repair and recombination proteins [BR:atrc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      139588058 (RBX1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      139588058 (RBX1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 139588058
NCBI-ProteinID: XP_071279080
LinkDB
Position
Unknown
AA seq 121 aa
MRAEQDGPIHAPKMAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRN
HIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYG
H
NT seq 366 nt   +upstreamnt  +downstreamnt
atgcgcgcggagcaggacgggccgattcacgcacccaaaatggcggccgcaatggatgtg
gacacccccagcggaaccaacagcggcgccggcaagaagcgcttcgaagtgaagaaatgg
aacgccgtggctctgtgggcatgggacattgtggttgataactgtgccatttgcagaaac
cacattatggatctgtgcatagaatgtcaagccaaccaagcatcggctacctctgaggag
tgcacagttgcatggggtgtctgcaatcacgctttccacttccactgcatctctcgctgg
ctcaaaactcgccaagtatgtccgctggacaacagggaatgggagttccaaaagtatgga
cactag

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