Agelaius tricolor (tricolored blackbird): 139589932
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Entry
139589932 CDS
T10815
Symbol
ABCD4
Name
(RefSeq) lysosomal cobalamin transporter ABCD4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc02010
ABC transporters
atrc04146
Peroxisome
atrc04977
Vitamin digestion and absorption
atrc04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
139589932 (ABCD4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
139589932 (ABCD4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
139589932 (ABCD4)
04980 Cobalamin transport and metabolism
139589932 (ABCD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atrc04131
]
139589932 (ABCD4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
atrc02000
]
139589932 (ABCD4)
Enzymes [BR:
atrc01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
139589932 (ABCD4)
Membrane trafficking [BR:
atrc04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
139589932 (ABCD4)
Transporters [BR:
atrc02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
139589932 (ABCD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_16
AAA_30
AAA_7
AAA_22
SbmA_BacA
nSTAND1
AAA_23
nSTAND3
Motif
Other DBs
NCBI-GeneID:
139589932
NCBI-ProteinID:
XP_071282924
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MAGGSSSSAGGAGARGRASSRLDGLFLRRFLRLLAVLFPGWPSPSALMFLTLLGVALLEQ
LVIYQVGVIPSQYYEVLGNKDFSGFKTLTAVAVTLIIVNSTVRLEAHVSWERKRKLLMAP
GMILVIKDSSLPIPWVTTTNCWFLFHFEKMFVLTYLSPSISLPLFQLKSFDQFICNMMYV
NWRKSLTEYLHSCYFQGQVYYNLLVLREDIDNPDQRISQDVERFCRQLSSMASKLVISPF
TLAYYTYQCFHSTGWLGPVSIFGYFIIGTMINKVLMSPIVSKLVQQEKLEGDFRFKHMQI
RVNAEPAAFYRAGRVEHMRTNRRLQSLLKTQRELIGKELWLYIGINTFDYLGSILSYVVI
AIPIFSGVYGDLSPIELSALVSKNAFVSIYLIGCFSQLIDLSSTVTDVAGYTHRIGELQE
TLLSLGRKENGNYSEAKTSWDLDGNHSGEEPVPRDTAFLLERVTLSVPSSGKLLIKDLNL
RISQGNSVMIVGNTGTGKTSLLRVLGGLWESTRGSISMLTCFGPRGVVFLPQRPFFTDGS
LREQVIYPLKEIYPLSGSADDERIVRFLELAGLTDLLARAGGLDEQVDWNWYDILSPGEM
QRLSFARLFYLQPKYAVLDEATSALTEEVEHELYRMCLQLGMTLISVGHRPSLEKFHSWI
LKLHGEGRWELTRCEKLKRLPSEEGY
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcggggggcagcagcagcagcgcggggggcgccggggcccgcgggcgggctagttcc
cggctggacgggctgtttctgcggcggttcctgcggctcctggccgtgctctttcccggg
tggccctccccgagcgccctcatgttcctgacgctgctcggtgtcgccttgctggagcag
ctggttatttaccaggtcggcgtcatccccagccagtactatgaagtcctagggaacaag
gacttctccggattcaaaacattgactgccgttgctgtgactctgatcattgtgaactcc
acggtaagactagaggctcatgtgtcttgggagaggaagagaaagctgctcatggctcct
ggcatgatcttggtcataaaggattcaagtctgcccataccctgggtcactactacaaac
tgttggtttttatttcattttgaaaaaatgtttgttctcacttatctctccccatccatc
tctttgcccttgttccagctaaaaagtttcgaccagtttatctgcaacatgatgtatgtg
aactggaggaaatccctcactgaatacctccacagctgctacttccaaggccaggtctac
tacaacctgctcgtgctgcgtgaggacatcgataacccggaccagcgcatcagccaggat
gtggagaggttctgcaggcagctcagctccatggccagcaagctcgtcatctcacccttc
acactggcctactacacataccagtgctttcacagcactggctggctaggcccggtgagc
atctttgggtatttcatcattgggacgatgattaacaaagtgttgatgagtccaattgtg
tctaaacttgtgcaacaggaaaaactggagggagatttcaggttcaagcacatgcagatt
cgtgtcaatgcagaaccagctgctttttacagggctgggcgagtggagcacatgcgcaca
aaccggaggctgcagagcctgctgaagacccagagagagctgataggcaaggagctgtgg
ctatacattgggatcaacacctttgattacctgggcagcatcctgagctacgtggtcatt
gccattcccatcttttctggtgtctacggtgacctgagtccaatagagctcagtgccctt
gtcagcaagaatgcctttgtttccatctacctcattggctgcttcagccagctcatagat
ctctccagcactgttactgatgtagctggctacacacacaggattggtgaactgcaggag
accttgctgagccttggcagaaaagaaaatggtaactactcagaagccaaaaccagttgg
gatttggacggcaaccattctggggaggagccagtgccaagggacacagctttccttctg
gagcgagtgacactctcggtaccatcctctggcaagctgctcatcaaggacttgaacctc
aggatctcacaaggaaacagtgtgatgattgtgggaaacactggtacagggaagacatct
ctcctgagggtccttggagggctctgggagagcacacgggggagcatcagcatgctgacc
tgctttggcccccgaggagtggtgttcctaccacagaggcccttcttcactgacggaagc
ctgcgtgagcaggtgatctatcccctgaaggagatctatccactttcagggtctgcagat
gatgagaggattgtgcgattcctggagctggctgggctgactgatttgctggcaagggct
ggaggactggatgaacaggtggactggaactggtatgacatcctgtccccaggggagatg
cagaggctctcatttgcacggctcttctacctccagccaaaatatgcagtgttagatgaa
gccaccagcgccttgacagaagaggtggagcatgaactgtaccgtatgtgccttcagctg
ggcatgacactgatcagtgtgggacacagacccagcctggaaaagttccacagctggatt
ttgaaacttcatggggagggaagatgggagctcactcgatgtgagaagttgaagcggctc
ccctctgaggaaggatactga
DBGET
integrated database retrieval system
