Agelaius tricolor (tricolored blackbird): 139592763
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Entry
139592763 CDS
T10815
Symbol
PHC1
Name
(RefSeq) polyhomeotic-like protein 1
KO
K11456
polyhomeotic-like protein 1
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
139592763 (PHC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atrc03036
]
139592763 (PHC1)
Chromosome and associated proteins [BR:
atrc03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
139592763 (PHC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHC2_SAM_assoc
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
zf-CGNR
Motif
Other DBs
NCBI-GeneID:
139592763
NCBI-ProteinID:
XP_071289083
LinkDB
All DBs
Position
Unknown
AA seq
994 aa
AA seq
DB search
METESEQNSNSTSGSSSSGGSTRPQISQMSLYERQAVQALQALQRQPNAAQYFHQFMLQQ
QFNSAQLHSLAAVQQATIAASRQASSPNTSTSQQTTTTQASINLATTSAAQLISRSQSVS
SPSATTLTQSVLLGNTTSPPLNQSQAQMYLRPQLGNLLQVNRTLGRNVPLASQLILMPNG
AVAAVQQEVPPTQSPGVHADTDQVQNLAVRSQQTSAANAQLQGSAQKTALPGSSQASGLP
QAASTGQSMAVAQASSSGAGQSLNLSQAAAGSNGVSGGVVATGGSQPSMALSQSSSAGAT
GSCQRKGTGVVQPLPVAAAQAVTVSQGSQTETENAAAKKGDTDSGGQQTVGMNLTRTATP
APSQTLISSATYTQIQPHSLIQQQQQIHLQKQVVIQQQIAIHQQQFQHRQSQLLHTATHL
QLAQQQQQQQAASLTQQQQQAQPPQQQAPPQNQQQAQTLVVQPMLQSQPPHLQLQQDSPC
QPVTKSPVPIQSKSLVTPIKPPQLGPAKMSATQQPPPHIPVQVVGTRQQGSGQAQALGLA
QIAAAVPTSRGMPAVVQPVSQTHAASPSSSSAPASSQEAPPLTTGVNLAQVQGTAHMVKS
PASSPVVAQMPAAFYMQSVQLPGKSQTLAVKRKAESEEEKEEPASVTTLMPARSSPVTDN
PKTMEEKSGLGDNSDPAAIATPNATSSEGVSATPTSASTPNLALVSRQMGDSKPPQAIVK
PQILTHIIEGFVIQEGAEPFPVGCSQLLKESEKPLQGEAPSGQNENLSSNSLGEDSASME
LDKKANLLKCEYCGKYAPASQFRGSKRFCSMTCAKRYNVSCSHQFRLQRKKMKEFQEANY
ARVRRRGPRRSSSEIARTKIQGKRHRGQEDSSRGSDNSSYDEALSPTSPGPLSVRASHGE
RDLANSNMAPPTPDLHGINPVFLSSNPSRWSVEEVYEFIASLQGCQEIAEEFRSQEIDGQ
ALLLLKEEHLMSAMNIKLGPALKICAKINVLKET
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgaaagtgagcagaactccaactccaccagcgggagctccagttctggagga
agcacccggcctcagatctcgcagatgtctctctatgagcggcaggcagtacaggctctg
caggcactccagagacagcccaatgcagcccagtacttccatcagttcatgctccagcag
cagtttaacagtgcccaacttcacagcctggctgctgtccagcaggctacaattgcagcc
agtagacaggccagctcccccaacactagcacctcgcaacagaccaccacaacccaggct
tctatcaaccttgccaccacgtcagctgctcagctgatcagtcggtcgcagagcgtgagc
tccccgagcgccaccacgctgacgcagtctgtgctcctcgggaacaccacctcacctcct
ctcaaccagtcacaggcacagatgtaccttcggccgcagctggggaacctgttgcaggtg
aaccggaccttgggccgcaatgtgcctctcgcctcccagctcatcctgatgcccaatggg
gctgtggctgctgtccagcaggaggtaccacccactcagtctcctggggtccacgcagac
acagaccaggtgcagaacttggctgtgaggagccagcagacctctgccgctaatgcccag
ctccaaggctctgctcagaagacggccctgccaggcagctcccaggcttcgggcttaccg
caggccgccagcacgggccagagcatggccgtggcccaggcctcctccagcggggcaggc
cagtccctcaacctgagccaggcagcagcgggcagcaatggtgtctccgggggcgtggtg
gccaccggtgggagccagccctcaatggcactgagccagagctcctcagcaggtgccact
ggcagttgccagaggaagggcactggggtggtccagccgctgcccgtggcggctgcccag
gccgtgactgtcagccagggcagccagacagagacggagaacgcagctgcaaagaagggt
gacacagacagtggtggacagcaaacggtgggcatgaacctcaccaggacagctacacca
gcacccagccagacgctgatcagctcagcaacatatacgcagatccagccacactcgctg
atccagcagcagcagcagatccatctgcagaagcaggtggtgatccagcagcagatagcc
attcaccagcagcagttccagcaccgccagtcccagctcctccacacagccacccatctc
caacttgctcaacagcaacaacagcagcaagcagcatctctgacccagcagcagcagcaa
gctcagcctccgcagcagcaggctccccctcaaaaccagcagcaggcacagacccttgtt
gtgcaacctatgttgcagtcccagccaccgcatttacagctccagcaggacagtccgtgc
cagccagtcaccaagtcacctgttcctatccagtcaaaatctctggtcacccccatcaaa
ccccctcagcttgggcctgccaaaatgtcagcaacacagcagcctcctccacacatccca
gtgcaggtggtgggcactcggcagcagggctcaggccaagcccaagcgctgggcttggct
cagattgctgcagcggtgccgacttcgcggggaatgccagctgtagtccagcctgtttcc
caaacccatgctgcttccccatcatcatcttcagctccagcatcctcacaggaagctccc
cctctcaccacaggggtgaatttggcacaagttcaaggcacagcccacatggtgaagagc
ccagcttcctctccagttgtggctcagatgccagcagcattctacatgcagtctgtccag
ttgccaggcaaatctcagaccttggcagtaaagcgcaaggcagagtcagaggaagagaag
gaggagccggccagtgtcaccacactcatgcctgccaggtcctctcctgtaacagacaac
cccaaaaccatggaggagaagagtggccttggagataattctgatcctgctgccattgca
accccaaatgccacatcaagtgaaggagtctcagccacccccacctctgcttccactcca
aacctggcattggtgtcacgtcagatgggagactccaaacctccgcaagccatcgtcaag
ccccagatcctcacacacatcattgaaggctttgtcatccaggagggagcagagcccttt
ccagtgggttgttctcagctgctgaaagaatctgagaaaccactgcagggagaggctcct
tctggtcagaatgaaaacctgtccagcaattctctgggagaggacagtgcttccatggag
cttgacaagaaggcaaacttgttgaagtgtgaatattgtgggaagtatgccccagcaagc
cagttccgtggctccaagaggttttgttccatgacctgtgctaaaaggtacaatgtcagc
tgcagccatcagttccggctgcagagaaagaagatgaaggaattccaggaagccaactat
gcccgtgtgcgccgacggggaccacggcgcagcagctccgaaatcgctcgaacaaagatc
cagggcaagcgccacaggggccaggaagactcgagccgaggctctgataactccagctat
gatgaagctttgtcccctacatctccaggacccctgtcagtaagggccagtcatggagag
agggacctggcaaactctaatatggccccccctaccccagatctacatggcatcaatcca
gtcttcctgtcgagcaaccctagtcgttggagtgtggaggaagtgtacgagttcattgca
tcgttgcaagggtgccaagaaattgctgaggaatttcggtcacaggaaattgatggtcag
gccctgttgcttctgaaggaggaacatctcatgagtgccatgaacatcaagctgggacca
gctctcaagatctgtgccaagatcaatgtcctcaaggagacctaa
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