KEGG   Agelaius tricolor (tricolored blackbird): 139595725
Entry
139595725         CDS       T10815                                 
Symbol
RAD18
Name
(RefSeq) E3 ubiquitin-protein ligase RAD18 isoform X1
  KO
K10627  E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
Organism
atrc  Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:atrc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:atrc04121]
    139595725 (RAD18)
   03400 DNA repair and recombination proteins [BR:atrc03400]
    139595725 (RAD18)
Enzymes [BR:atrc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     139595725 (RAD18)
Ubiquitin system [BR:atrc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    139595725 (RAD18)
DNA repair and recombination proteins [BR:atrc03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    139595725 (RAD18)
SSDB
Motif
Pfam: SAP zf-C3HC4_2 zf-C3HC4 zf-RING_6 zf-RING_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 LEM SAP_new25 zf-rbx1 RING_XB3-XBAT31 Sina_RING zf-RING_10
Other DBs
NCBI-GeneID: 139595725
NCBI-ProteinID: XP_071295377
LinkDB
Position
Unknown
AA seq 491 aa
MALAMPLLEPPWPPGLAPLKAVDDLLRCGICFDYFSIAVIIPQCSHSYCSLCIRKSLSYK
TQCPTCCVAVSESDLKNNRILDDLVKSFNSARQQLLQLVLEAPPAPSPPAHSHLSPGSQP
ESEQVPGIDSSLSKDKVCTSTKAGGLAWTGEKSLKTEEHHGLHSTSAELGGKDSKVIAQE
IPGCTQSHEKPSTSVLKGDKKVECPVCEVAILEQYINKHLDSCLTRGEKKDSLRSSDHKR
KLMSKVVYNLLSDRDLRKKLKEHGLSTSGTRQQLIKRHQEFVHMYNAQCDSLNPKSVAEV
VKELEKNEKIRVQLECNKPGENSLTFTKDQTEEEIDEIHTEYRNKHRSEFKFLVDQVNKR
WKKMGERKAESAQNKEEVAVKELPAAAEPGEEDPTVGKAQALQSEIPDGQRSESPGLKQW
QRSASPEFSLSSGSTCSTNSDILADVEGSETCSASSDSSSSVALTGNKRKLRRPRVPEHS
GAVPQGKRKRS
NT seq 1476 nt   +upstreamnt  +downstreamnt
atggcgctggccatgcccctgctggagccgccctggccgcccggcctggctccgctcaag
gccgtggatgacttgctgcgctgcgggatttgcttcgactacttcagcatcgccgtgatc
atcccgcagtgctcgcacagctattgttccctctgtatccgcaagtctttgtcctacaaa
acccagtgtccaacgtgctgtgtggcagtctcagaatctgacctgaaaaacaaccggatt
ttagatgatctagtgaagagctttaattctgcaaggcagcagctgctgcagttggtgttg
gaggctcccccggctccatcccccccggcccacagccacctgagtcctggttctcagccg
gagtctgagcaggtgccaggcattgacagctccctgagcaaggacaaagtctgcacctcc
acgaaggcaggcggcctggcatggactggtgagaagagtctcaaaactgaggagcaccat
ggcctacacagcacttctgcagagcttggtggtaaagacagcaaagtgattgcacaagag
attcctgggtgcacccaaagtcatgaaaagccttctacatctgtgctcaaaggagacaag
aaagtggaatgtcctgtttgtgaggttgctattctggagcaatacataaacaaacatctg
gacagctgcttgaccagaggggagaagaaggacagcctgcgaagttctgaccacaaaagg
aagctgatgtccaaagttgtttataacctgctgtcggatcgggatctgaggaagaagctc
aaggagcacggtctgtccacctctgggacccgccagcagctcatcaagaggcaccaggag
tttgtgcacatgtacaatgctcagtgtgattccctgaaccccaaatctgttgcagaggtt
gttaaagagctggaaaagaatgagaagattcgggttcagctagagtgtaataaacctggt
gaaaatagcttgaccttcacaaaggaccagacagaggaagaaatagatgagatccacact
gaatatcgaaacaaacacagaagtgaattcaagttcttggtggatcaagtaaataaacgg
tggaagaaaatgggtgagaggaaagcagaaagtgctcaaaacaaagaggaagttgctgtc
aaagagctgccagcagctgcagaacctggagaagaggatcccacagttggaaaagcccaa
gcactccagtcagaaattcctgatggccaaagaagtgaatctcctggcttgaagcagtgg
cagagatcagcctctcccgagttctccctgtcatctggctcaacatgcagcaccaattcg
gacattctggcagatgtggaagggtctgagacgtgttcagcgtcctctgacagcagcagc
tccgtggccctgacagggaacaagaggaagctgcggcggccgcgcgtccccgagcacagt
ggggccgtgccccagggcaagaggaagaggagttag

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