KEGG   Agelaius tricolor (tricolored blackbird): 139597947
Entry
139597947         CDS       T10815                                 
Name
(RefSeq) protocadherin gamma-A12-like
  KO
K16497  protocadherin gamma subfamily C
Organism
atrc  Agelaius tricolor (tricolored blackbird)
Brite
Cell adhesion molecules [BR:atrc04515]
 Cadherins
  Protocadherins
   139597947
SSDB
Other DBs
NCBI-GeneID: 139597947
NCBI-ProteinID: XP_071299873
LinkDB
Position
Unknown
AA seq 1824 aa
MAVRQRRQRRGPGGGRALLAALLLLLLCVWCRAAGERLRYAIPEELGRGSLVGPLARDLG
LSADELPARKLRLSEEKQYFTVNEENGNLYVNERLDREEMCGESATCSVSFEVLVHNPLN
IFRVEVGIEDVNDNSPVFSKAALELEITELTVPGTRFPLEMARDADAGSNSQLTYQLSSN
PSFSLILDENLGGKKQPELVLEKALDREKQSSFEFVLTAVDGGDPARSGTVEIRINVTDA
NDNQPVFSQRLYEARAAENLPAGSLVLQVVATDADAGSNGRVSYSFGNVPDAIRRLFTVD
SDSGEIRLVGPLDFEEKNKYIFGLEARDGGGLTGHCEVQIDVTDENDNAPEIIILSLSSP
VSEDAPTGTVVAVLKVRDRDSDENGEVSCSLSGEAPLSIVASSGGSYKVVTSGALDREQA
SEQRVTVVARDRGRPALWSSRELVLEVSDVNDNAPVFEEAAYSAYVAENNAAGALVLRVQ
ARDADAGANGRVSYWLAGGSAGAAGAAPLVSVEARSGALYAQRSLDYEQCREFTVAVRAQ
DGGSPARSSTATVRVFVLDRNDNAPRVLWPAVAAAAGEAPGGAAAPFEVVPRSAEAGYLV
AKVVAVDADAGRNAWLSYELVQASEPALFRVGLHSGEVRTARAVGERDAAKQRLVAVVKD
HGQPALSATATLHVVLAESLQEALPELSERPAGAEAAAAAELQFYLVLALALLSALLVLS
VALAVLARLRRAGPPAVLRCLGAQRFSLAGAAFPADFCEGTLPYSYNLCVPPPARALPEA
AWPPPPVPILSAEELLGGDSLDKPSPNSTAVTGESPANPDAPQCREEAAGAAVDREEREE
ARSATGSPARCGSARSVVRSVSELAAGLDRRCCGAGGSAGEMCAAGRRWGRRQRALLWAV
LLAAWEAAWGQLRYSVPEEMPKGSFVGDVAKDLGLQLAEINEPGVRIVSQRTVQYFALHG
KTGHLVTAERIDREQLCESVQQCVLRCELIVEGEMKFYEIEVEITDINDNAPSFKETELE
QRMSETSPVGSRFPLSEAHDPDSGRNSLQSYELSGDEHFSLAVQAGPGGDQRPELVLAKA
LDREEAAFHELVLRASDGGDPARTGTAQIRVTVLDANDNAPVFSQAEYTVRVPEDVPVGS
TLITVTAKDNDEGGFGNVKYSFKKVTEKASKTFHLDSETGAVTLSRSLDFEEGDSYKLEV
QAQDDGGLSDTAEVTITVTDINDNVPVISMRSALSEISEDAPSGTVVALLHVHDKDSGKN
GEVRCSLDGDLPFRLQSSHGSYYSVVTARELDREQVSEYNVTVRAADGGSPALQSSAVLA
LQVLDVNDNAPVFLEERYSARLAENNAAGALVLTVRATDADWGQNARVRYRLAEGRVRGA
PLSSYVSVQAETGALYALRSLDYEQLRELQLCVRAEDGGAPALSSNVSVRLLIVDENDNA
PQVLYPAPAAAAGSGAAAAWSGVELAPRWAEAGALVAKVVAVDADAGQNAWLSYELAKAT
EPGLFRVGLHSGEVRTARSPLARDAARHVLLVLVRDHGRPALSATATLSVVLAESVAELL
AELGSAAHEAAAPGEPAASLTRWLVLAVAAVSCLFVAFLLLLLALRLRRCHRQQLLPPDS
GALRGVPVSHFVGIDGVRAFLQSYSHDVSLTADSRKSHLRFSAASCCDTLPARPPPDEPA
PLLGDGDPAGALPADSAPLPQAQPNTDWRFSQTQRPGTSGSQNGEEAGAWPNNQFDTEML
QAMILASANEAADGNSTLGGGNGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAA
GKRDAKNAAPAGGNKKKSGKKEKK
NT seq 5475 nt   +upstreamnt  +downstreamnt
atggcggtgaggcagaggcggcagaggcgcgggccgggcggcgggcgagcgctgctggcc
gcgctgctgctgctgctgctgtgcgtgtggtgccgggcggcgggcgagcggctccgctac
gccatccccgaggagctgggcagaggctcgctcgtggggccgctggcgcgggacctgggg
ctcagcgcggacgagctgccggcgcgcaagctgcggctgagcgaggagaagcaatacttc
acggtgaatgaggagaacgggaacctgtacgtgaacgagaggttggaccgggaggagatg
tgcggcgagtcggcgacctgctccgtcagcttcgaggtgctggtgcacaacccgctgaac
attttccgcgtagaagtgggcattgaggacgttaatgacaattccccggtcttcagcaag
gctgctctggaactagaaattaccgaattgacagtgcccgggactcgttttcctctagag
atggcccgagatgcggacgcaggaagtaactcccagctgacttaccagctatccagcaat
ccatccttctctctcatcttggatgaaaacctgggtggaaagaagcaacccgaattagtg
ctggagaaagcattggaccgggagaagcagagctcatttgagttcgtgttgacagcggta
gatggcggcgaccctgcgaggtccgggactgtagagattcgcatcaacgtgacggatgca
aatgataaccagcccgtattcagtcaaagactatacgaggcgcgagcagcggagaatctg
ccggcggggtcgctggtgttgcaggtggtggccacggatgcggacgcaggctccaatggg
cgggtgtcctactccttcggcaacgtcccggatgcaattcgcagattgttcactgtcgac
agtgatagtggagagatcaggttggtgggtcccctcgatttcgaggagaagaataaatac
atcttcggcttggaggcgagggacggtggcgggctcaccggtcactgtgaagtgcagata
gacgtcacggacgagaacgacaacgcacctgagatcatcattctgtccctctcgagtccc
gtgtccgaggatgccccgactggcaccgtagtggccgtgctgaaagttcgggatcgggac
tccgacgagaacggtgaggtgtcgtgctcgctgtcgggagaggcgccgctgtcgatcgtg
gcgtcgtcgggcggctcgtacaaggtggtgacatcgggcgcgctggaccgcgagcaggcg
tcggagcagcgcgtgacggtggtggcccgggaccggggcaggccggcgctgtggagcagc
agggagctggtgctggaggtgtcggacgtgaacgacaacgcgccggtgttcgaggaggcg
gcgtacagcgcgtacgtggcggagaacaacgcggcgggcgcgctggtgctgcgcgtgcag
gcgcgggacgcggacgcgggcgccaacgggcgcgtgagctactggctggcgggcggcagc
gcgggcgcggcgggcgcggcgccgctggtgtcggtggaggcgcggagcggcgcgctgtac
gcgcagcgctccttggactacgagcagtgccgcgagttcacggtggccgtgcgggcgcag
gacggcggctcgccggcgcgcagctccacggccacggtgcgcgtcttcgtgctggaccgc
aacgacaacgcgcccagggtgctctggcccgcagtggcggcggcggcgggagaggctccg
ggaggggcggcggcgcctttcgaggtggttccgcgctcggccgaggccggctacctggtg
gccaaggtggtggcggtggacgcggacgcggggcgcaacgcgtggctgtcctacgagctg
gtgcaggcgtcggagccggcgctgttccgcgtggggctgcacagcggcgaggtgcgcacg
gcgcgcgccgtgggcgagcgggacgcggccaagcagcggctggtggccgtggtgaaggac
cacgggcagccggcgctgtcggccacggccacgctgcacgtggtgctggccgagagcttg
caggaggcgctgccggagctgagcgagcggccggcgggcgccgaggcggcggcggcggcc
gagctgcagttctacctggtgctggcgctggcgctgctctcggcgctcttggtgctgagc
gtggcgctggccgtgctggcgcggctgcgccgggccgggccgcccgccgtgctgcgctgc
ctgggcgcgcagcgcttctcgctggccggcgccgccttcccggccgacttctgcgagggc
accttgccctactcctacaacctgtgcgtgccgccgcccgcccgcgccctgcccgaggcc
gcttggccgccgccgccggtgcccatcctgtcggcggaggagcttctgggcggcgattcc
ctcgacaagccgagcccgaacagcaccgccgtgacgggagagtcgccggccaatcccgac
gcaccgcagtgccgggaggaggctgcgggcgccgctgttgaccgagaggagcgagaggaa
gctcggagcgctaccggcagccccgcccgctgcggatcggctcgctcggttgttcgctcc
gtgtccgaactggcagcgggattggatcggcggtgctgcggtgccggcggttccgcgggc
gagatgtgcgcggcggggaggcgctggggccggcggcagcgagctctgctctgggccgtg
ctgctggcggcgtgggaggcggcgtgggggcagctgcgctactcggtgcccgaggagatg
cccaagggctccttcgtgggcgacgtggccaaggacctggggctgcagctggcagagatc
aacgagccgggcgtccgcattgtctcccaacgtactgtgcagtatttcgctctgcatggg
aagacgggacatttagtgacagcagagaggatcgacagagagcagctgtgcgagagtgtg
cagcaatgcgtgctgcgctgtgaactgatagtggagggggaaatgaaattctatgaaata
gaagtggaaatcactgatattaacgacaacgcgcccagcttcaaggaaacagagctagaa
cagagaatgagcgagacatcaccagtggggtcgcgatttcccctctccgaggctcacgat
ccggactctggccggaattcgctgcagagctacgagctgagcggtgacgagcacttctcg
ctggccgtgcaggcgggccccggcggcgatcagcgtcccgagctggtgctggccaaggcg
ctggaccgggaggaggcggcgtttcacgagctggtgctgagggcgagcgacggcggcgat
ccggcacggacgggcacggctcagatccgcgtgacggtgctggacgcgaacgacaacgcg
cccgtgttcagccaggctgagtacacggtgcgtgtgcccgaggacgtgcccgtgggttcc
accctcatcactgtcacagccaaggacaacgacgaggggggttttggtaacgtgaaatac
tcgtttaagaaagtaaccgagaaagcatcgaagacattccatcttgactctgagactgga
gctgtcacgctatcgcggagcctggacttcgaggaaggtgactcatataagcttgaggtg
caggcacaggatgacggcggcctttcggacactgccgaagtcacgatcactgtcacagac
ataaacgacaacgtgccggtgatttctatgcggtcagcgctaagtgagatttctgaggac
gccccttcgggaacggtggtcgccctgctgcacgtacatgataaagactcggggaagaac
ggcgaggtgcgctgctcgcttgacggggatctcccgttccggctgcagagctctcacggc
agctactacagcgtggtgacagcgagagagctggaccgggagcaggtgtcggagtacaac
gtgacggtgcgggcggccgacggcgggtcgccggcgctgcagagcagcgcggtgctggcg
ctgcaggtgctggacgtgaacgacaacgcgccggtgttcttggaggagcgctacagcgcg
cggctggcggagaacaacgcggcgggcgcgctggtgctgacggtgcgcgccacggacgcg
gactgggggcagaacgcgcgcgtgcgctaccggctggcggaggggcgggtgcggggcgcg
ccgctgtcgtcgtacgtgtcggtgcaggcggagacgggcgcgctgtacgcgctgcgctcc
ttggactacgagcagctgcgcgagctgcagctgtgcgtgcgggcggaggacggcggcgcg
ccggcgctgagcagcaacgtgtcggtgcggctgctgatcgtggacgagaacgacaacgcg
ccgcaggtgctgtacccggcgccggccgcagcggcgggctcgggcgctgctgcggcgtgg
tcgggcgtggagctggcgccgcgctgggccgaggccggcgcgctggtggccaaggtggtg
gcggtggacgcggacgcggggcagaacgcgtggctgtcctacgagctggccaaggccacg
gagccggggctgttccgcgtggggctgcacagcggcgaggtgcgcacggcgcgctcgccg
ctggcccgcgacgcggcgcgccacgtgctgctggtgctggtgcgggaccacgggcggccg
gcgctgtcggccacggccacgctgagcgtggtgctggccgagagcgtggccgagctgctg
gccgagctgggcagcgcggcccacgaggcggcggcgccgggcgagccggccgccagcctg
acgcgctggctcgtgctggccgtggccgccgtctcgtgcctcttcgtggccttcctgctg
ctgctgctggcgctgcgcctgcgccgctgccaccgccagcagctgctgccgccggacagc
ggcgccttgcgcggcgtgcccgtctcgcacttcgtgggcatcgacggcgtgcgcgccttc
ctgcagtcctactcgcacgacgtgtcgctcacggccgactcgcgcaagagccacctgcgc
ttctcggccgccagctgctgcgacaccctcccggcccggccgccgcccgacgagcccgcg
ccgctgctcggggacggggacccggccggcgccctccccgcggattctgcccccctcccg
caagctcagcctaacacagactggcgcttctctcagacccagagacctggaacaagtggc
tcccagaatggagaggaagctggagcctggcccaacaaccagtttgacacagagatgctc
caagccatgatcctggcttcagccaatgaagctgctgacggtaactcgaccctgggcggc
ggcaatggcacgatggggctgagcgcccgctacggcccgcagttcaccctgcagcacgtc
cccgactaccggcagaacgtgtacatcccgggcagcaacgccaccctcaccaacgccgcc
ggcaagcgcgacgccaagaacgccgcccccgccggaggcaacaagaagaaatccgggaag
aaggagaagaagtag

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