KEGG   Agelaius tricolor (tricolored blackbird): 139600841
Entry
139600841         CDS       T10815                                 
Symbol
AGRN
Name
(RefSeq) agrin isoform X1
  KO
K06254  agrin
Organism
atrc  Agelaius tricolor (tricolored blackbird)
Pathway
atrc04512  ECM-receptor interaction
atrc04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:atrc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    139600841 (AGRN)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    139600841 (AGRN)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:atrc00535]
    139600841 (AGRN)
Proteoglycans [BR:atrc00535]
 Extracellular matrix (ECM) proteoglycans
  Basement membrane proteoglycans
   139600841 (AGRN)
SSDB
Motif
Pfam: Laminin_G_1 Laminin_G_2 Kazal_2 Kazal_1 NtA EGF_laminin Kazal_CFAI EGF SEA Laminin_G_3 hEGF EGF_CA Bac_rhamnosid_C
Other DBs
NCBI-GeneID: 139600841
NCBI-ProteinID: XP_071305453
LinkDB
Position
Unknown
AA seq 2169 aa
MQICALSSRATAASAERLPDLLLLLLLLLGFSSFSPPLAASLSLPPLSFFPPFHLPGTKV
ALSAAAPALPASGAALSAGPGGTATAMGPRLAPTLLALLALLAPLARPARAGCPERELER
REEEANVVLTGTVEEIMNVDPVHHTYSCKVRVWRYLKGKDIVTHEILLDGGNKVVIGGFG
DPLICDNQVATGDTRIFFVNPAPQALWPAHRNELMLNSSLMRITLRNLEEVEHCVEEHRK
LLADKPNSYFTQTPPPPRDGCRGMLCGFGAVCERSPSEPGQASCVCKKGPCAPVVAPVCG
SDHSTYSNECELDRAQCNQQRRIKVVSKGPCGSKDPCAEVTCSFGSTCVPSPDGQGARCV
CPSSCSGVAESPVCGSDGRDYRSQCHLNKHACDKQENVFKKFDGPCDPCQAVPSEPGRVC
RVNPRTRRAELLPRPEGCPPGRDPVCGDDGVTYESECAMARSGAIRGMDIQKVRSGQCQP
QDQCPEPCRLGAVCLNRRGAARCSCERIACDGAFRPLCARDGRTYGSDCQRRRAECLQQQ
HIPTRHGGPCDLGAPSPCLSVECSFGATCVVKNQEAVCECQQQCQGRYDPVCGTDQRSYG
SPCELQAMACLLQRDIGVKHKGPCEPCGKCQFGAICEAETGRCVCPTECVPSAQPVCGTD
GNTYGSECELHVRACTQQKDILVAAQGHCKSCGSSVCSFGSRCVAGQCLCPRCQRQPPAP
VCGTDGVTYGSPCQLQEASCQLQKSIEVARMGPCEDECGSGGSGSGDGSECEQERCRHFG
GWWDEDAEDEPCVCDFTCVAVPRSPVCGSDGVTYGNECELKKTRCEKRQELLVTSQGACR
ALATTPPPLLVVHCSQSVYGCCPDNVTLALGVGAAGCPSTCQCNPYGSYGGSCDPGTGQC
SCKPGVGGLKCDRCEPGFWNFRGIVTDGRSGCTPCHCDPVGSVRDDCEQMSGLCSCRTGI
TGMKCTQCPDGSSLGTTGCHKDPSAPRSCKELSCDFGASCVELNGFAHCECPSPLCPEAN
TTKVCGSDGVTYGDQCQLRTIACRQGQHITVKHVGQCHESITHTSPPVPPTPLPTVPPEL
PAPPGATPRSPLPTGAATSPSLPPARPTERGHPTTRRVTTARPATTTAWVTHGAHKATIR
PLATVPVVAATSQPGYSESGSAEGSGDQDMGASGDQEASGAGSAGEEEPDEGQVPPTPAI
ERATCYNSALGCCSDGKTAAADSEGTNCPATKVFQGVLILEEVEGQELFYTPEMADPKSE
LFGETARSIESALDELFRGSDVRKDFRSIRVRDLGQSSAVRVIVEAHFDPATSYTATDVQ
GALLKQLRAAKRKTILVKRPQQEHIKFMDFDWIPRLFTTTVTTTTATTMAPGTTRRAPAA
TAALGQHGEPGGSTHSPGSTHSPGGSTHSPGTTRSPGSSRRMKPTQLPPGTALARPCESQ
PCLHGGTCQDDGHHFTCSCPAGTGGALCEKSPGGSVPSFGGSSVLAFRTMRAYHTVRISL
EFRALEPQGLLLYNAQRHGKDFISLALLGGFVELRFDTGSGTGTVTSRVPVEPGRWHRLL
VTRNRRMGTLAVDGEPPVSGHSPPGTDGLNLDTELFIGGVPHEHMALVAERTGATSGLRG
CVRALAINNRGHELHQGSNDVLYATAVGQCGTDPCQPSPCHHGGTCHAREADMFHCQCPE
AYTGPTCAFERNPCEPSPCHASATCLVLPAGGALCACPVGREGDLCERVTEQDQSVPFLP
EFNGFSYLELNGLQSFVPDLQDKMSMEVVFLAKKPSGMIFYNGQKTDGKGDFVSLALHEG
HLEYRYDLGKGPALLRSKEPVPLNTWVSVLLERSGRKGVLRVNNGHRVTGESPKSRKVPH
MVLNLKEPFYVGGAPDFSRLARAAAISSGFEGAVQRISVGGVPVLKEQNIRSAREVSPFR
GHPCTQKPNPCQHGGSCSPSLGSYQCSCHRGFSGAHCEKVIIEKAAGDTEAVAFDGRTYL
EYHNSITKSHLSNEIPAPEALDFPSEPSEKALQSNHFELSIKTEATQGLLLWSGKGLERS
DYIALAIVDGRVQLSYDLGSKAVTLRSSVPVNTNQWVHIRASRVQREGSLQVGNEAPIAG
SSPLGATQLDTDGALWLGGLDKLSVPQRLPKAFSTGFVGCMRDVLVDRRELHLLEDALNQ
PRILHCSAK
NT seq 6510 nt   +upstreamnt  +downstreamnt
atgcaaatctgcgcgctttcttcccgggccacggcagcgagcgccgagcgccttccagat
ctcctcctcctcctcctcctcctcctgggattttcctccttctcccctcccctcgctgcc
tccctttccctccctcccctctctttctttcctccttttcacctccctggaacaaaagtg
gccctttcggctgctgcgccagcgctgcctgcgagcggggccgctttgtctgccgggccc
ggcggcaccgccaccgccatggggccgcggctggcaccgacgctgctggcgctgctggcg
ctgctggcaccgctggcacggccggcccgggccggctgccccgagcgggagctggagcgc
cgcgaggaggaggccaacgtggtgctgacgggcacggtggaggagatcatgaacgtggac
ccggtgcaccacacctactcgtgcaaggtgcgggtctggcgctacctgaagggcaaggac
atcgtcacccacgagatcctgctggacgggggcaacaaggtggtgatcgggggcttcggg
gaccccctgatctgcgacaaccaggtggccacgggggacacgcgcatcttcttcgtcaac
cccgcgccgcaggcgctgtggccggcgcaccgcaacgagctcatgctcaactccagcctg
atgcgcatcaccctgcgcaacctggaggaggtggagcactgcgtggaagaacataggaag
cttctggccgacaaacccaacagttacttcacgcagacgccgccgccaccgcgggatggg
tgccgggggatgctgtgtggcttcggggccgtgtgcgagcgcagcccctcggagccgggc
caggcctcgtgcgtgtgcaagaagggtccctgtgcccccgtggtggccccggtgtgcggc
tccgaccactccacctacagcaacgagtgcgagctggacagggcccagtgcaaccagcag
aggaggatcaaagtggtcagcaagggaccctgcggctccaaggacccctgtgccgaggtc
acctgcagctttggcagcacgtgtgtcccctcccctgacggccagggcgcccggtgcgtg
tgtccctcgtcgtgcagcggcgtcgccgagagccccgtgtgcggcagcgacggccgcgac
taccgcagccagtgccacctcaacaagcacgcctgtgacaagcaggagaacgtcttcaag
aagttcgatggcccctgtgacccgtgccaggccgtgccgagcgagccgggccgcgtgtgc
cgggtgaatccgcggacgcggcgggcggagctgctgccccggcccgagggctgtcccccg
ggcagggaccccgtgtgcggcgacgacggcgtcacctacgagagcgagtgcgccatggcc
cgctcgggggccatccgcggcatggacatccagaaggtgcgctcggggcagtgccagcct
caggaccagtgcccggagccgtgccggctgggcgccgtgtgcctgaaccggcgcggggcc
gcgcgctgctcctgcgagcgcatcgcctgcgacggcgccttccggcccctgtgcgcccgc
gacggccgcacctacggcagcgactgccagcgccggcgcgccgagtgcctgcagcagcag
cacatccccacccgccacggcgggccctgcgacctgggtgctcccagcccctgcctgagc
gtggagtgctccttcggggccacgtgcgtggtgaagaaccaggaggccgtgtgcgagtgc
cagcagcagtgccagggccgctacgaccccgtgtgcggcaccgaccagcgcagctacggc
agcccctgcgagctgcaggccatggcctgcctgctgcagagggacatcggcgtcaagcac
aaggggccctgcgagccctgcgggaagtgccagtttggtgccatctgtgaggcagagacg
gggcgctgcgtgtgccccaccgagtgcgtgccctcggcgcagcccgtctgcggcaccgac
ggcaacacctacggcagcgagtgcgagctgcacgtcagggcctgcacccagcagaaggac
atcctggtggctgcccagggccactgcaagtcgtgtggcagctccgtgtgctcctttggc
agccgctgcgtggccgggcagtgcctgtgcccgcgctgccagcgccagcccccggccccc
gtctgcggcaccgacggcgtcacctacggcagcccctgccagctgcaggaggcctcgtgc
cagctgcagaagagcatcgaggtggccaggatgggaccttgtgaggacgagtgtggctca
ggaggctcaggctcgggggatggcagtgagtgtgagcaggagcgctgccgccacttcggg
ggctggtgggatgaggatgccgaggacgagccctgtgtctgtgacttcacctgcgtggcc
gtgccccgcagcccggtgtgcggctctgacggcgtcacctacggcaacgagtgcgagctg
aagaagacgcggtgtgagaagcgccaggagctcttggtcaccagccagggagcctgccgg
gccctggccaccaccccgccacccctgctggtcgtgcactgcagccagagcgtctacggc
tgctgccccgacaacgtcaccctggcgctgggcgtgggagctgctggatgtcccagcacg
tgccagtgcaacccctacggctcctacggtggctcctgtgacccgggcacggggcagtgc
tcctgcaagcccggcgtgggcggcctcaagtgcgaccgctgcgagcccggcttctggaac
ttccgcggcatcgtcaccgacggccgcagcggctgcaccccgtgccactgtgaccccgtg
ggctcggtgcgggatgactgcgagcagatgtcggggctgtgctcctgcaggacgggcatc
acgggcatgaagtgcacccagtgccccgacggcagcagcctgggcaccacgggctgccac
aaggacccctcagcccccaggtcgtgcaaggagctgagctgtgacttcggggcctcgtgc
gtggagctgaacggcttcgcccactgcgagtgcccgtccccgctgtgccccgaggccaac
accaccaaggtgtgtggctctgatggtgtcacctacggggaccagtgccagctgcggacc
atcgcctgcaggcagggccagcacatcacggtcaagcatgtggggcagtgccatgagtcc
atcacccacacgagccccccggtgccccccacgccgctgcccacggtgcccccggagctg
cccgcgccccctggggccaccccgcggtcccccctgcccaccggggcggccaccagcccg
tccctgccgccagccaggcccacggagcggggccaccccaccaccaggcgtgtgacaacg
gccaggccggccaccaccacggcctgggtcacccacggcgcgcacaaggccaccatccgc
ccgctggccactgtccccgtggtggcggccaccagccagcccggctacagcgagtccggc
agcgccgagggcagcggggaccaggacatgggcgccagcggggaccaggaggccagcggg
gcaggatctgctggcgaggaggagcctgacgagggccaggtgccacccacgcctgccatc
gagagggccacgtgctacaacagcgccctgggctgctgctccgacggcaaaaccgcagcc
gccgacagcgagggcaccaactgccccgccaccaaagtgttccaaggagtgctgatcctg
gaggaggtggagggccaggagctgttctacaccccagagatggccgaccccaaatccgag
ctcttcggggagacggcgcggagcatcgagagcgcgctggacgagctgttccggggttct
gatgtcaggaaggatttcaggagcatccgagtgcgggacctgggccagagcagcgccgtc
agggtcatcgtggaggctcactttgacccagccacgtcctacacggccactgatgtccag
ggggccctgctgaagcagctccgagctgccaagagaaaaaccatcctggtgaagaggccc
cagcaggagcacatcaaattcatggactttgactggatcccccggctcttcaccaccacc
gtcaccaccaccacggccaccaccatggcccctggcaccacgcgcagggcgcccgcggcc
accgcggccctggggcagcacggcgagcccgggggcagcacccacagccctggcagcacc
cacagccccgggggcagcacccacagccctggcaccacccgcagccctggcagcagcagg
aggatgaagcccacccagctgccccctggcacggccctggcacggccctgcgagtcccag
ccctgcctgcacggtggcacctgccaggacgacgggcaccacttcacctgcagctgcccc
gcgggcacaggaggggctctctgtgagaaatccccgggcgggtccgtgcccagtttcggg
ggctcctcggtgctggcgttccggaccatgcgcgcctaccacacggtcaggatctccctg
gagttccgcgcgctggagccccaggggctgctcctctacaacgcccagcgccacggcaag
gacttcatctcgctggcgctgctcgggggcttcgtggagctcaggtttgacacgggctct
ggcacgggcacggtcaccagccgcgtgccggtggagccggggcgctggcaccggctgctg
gtgacgcggaaccggcgcatggggacgctggccgtggacggggagcccccggtgagcggg
cacagccccccgggcaccgacgggctcaacctggacaccgagctcttcatcggcggagtg
ccccacgagcacatggcgctggtggcggagcgcacgggtgccacgagcggcctgcggggc
tgcgtgcgggccctggccatcaacaaccgcgggcacgagctgcaccagggctccaacgac
gtcctgtacgccacggccgtgggccagtgtggcaccgacccctgccagcccagcccctgc
caccacggcggcacctgccacgccagggaggccgacatgttccactgccagtgccccgag
gcctacacgggccccacgtgtgccttcgagaggaacccgtgcgagccctctccgtgccac
gcctctgccacctgcctggtgctgcccgccgggggggccctgtgcgcctgccccgtgggc
cgtgagggggacctgtgcgagcgagtgacagagcaggaccagtccgtgcccttcctgccc
gagttcaacggcttctcctacctggagctcaacgggctgcagagctttgtgcccgacctg
caggacaagatgtccatggaggtggtgttcctggccaagaagcccagcgggatgatcttc
tacaatggccagaagaccgatggcaaaggggactttgtgtccctggcactgcacgagggc
cacctggagtacagatacgacctgggcaaagggccagccctgctcaggagcaaggagccc
gtgcccctgaacacgtgggtcagtgtcctgctggagaggagcggccgcaagggcgtcctg
agggtcaacaacggccacagggtgacaggggagtccccgaaatcccgtaaggtgcctcac
atggtgctgaacctgaaggagcccttctacgtggggggagcccccgacttctccaggctg
gcccgagcagctgccatctccagcggcttcgagggagctgtgcagaggatctccgtgggt
ggcgtgcccgtgctgaaggagcagaacatccgcagtgccagggaggtgtccccattccgg
gggcacccctgcacccagaaacccaacccgtgccagcatgggggcagctgcagccccagc
ctgggcagctaccagtgctcctgccacaggggcttctcgggggcacactgcgagaaggtg
atcatcgagaaggcagccggggacaccgaggccgtggccttcgatggccgcacgtacctg
gagtaccacaacagcatcaccaagagccacctgagcaatgagatcccagctcccgaggcg
ctggatttcccctcggagcccagtgagaaggccctgcagtccaaccactttgagctgagc
atcaagacggaggcgacgcaggggctgctgctgtggagcgggaaggggctggagcgctcg
gattacattgccctggccatcgtggacggccgcgtgcagctcagctacgacctgggctcc
aaggccgtcaccctgcgctccagcgtgcccgtcaacaccaaccagtgggtgcacatcagg
gcctccagggtgcagagggaaggctccctgcaggttgggaacgaggcccccatcgccggc
tcctcgcccctcggggccacccagctggacacggacggggcgctgtggctggggggcctg
gacaagctgagcgtgccccagcgcctgcccaaggcgttcagcacgggtttcgtgggctgc
atgcgggacgtgctcgtggaccggcgggagctgcacctgctggaggatgccctgaaccag
ccccggatattgcactgctcggccaaatga

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