Agelaius tricolor (tricolored blackbird): 139600841
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Entry
139600841 CDS
T10815
Symbol
AGRN
Name
(RefSeq) agrin isoform X1
KO
K06254
agrin
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04512
ECM-receptor interaction
atrc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139600841 (AGRN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139600841 (AGRN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
atrc00535
]
139600841 (AGRN)
Proteoglycans [BR:
atrc00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
139600841 (AGRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Kazal_2
Kazal_1
NtA
EGF_laminin
Kazal_CFAI
EGF
SEA
Laminin_G_3
hEGF
EGF_CA
Bac_rhamnosid_C
Motif
Other DBs
NCBI-GeneID:
139600841
NCBI-ProteinID:
XP_071305453
LinkDB
All DBs
Position
Unknown
AA seq
2169 aa
AA seq
DB search
MQICALSSRATAASAERLPDLLLLLLLLLGFSSFSPPLAASLSLPPLSFFPPFHLPGTKV
ALSAAAPALPASGAALSAGPGGTATAMGPRLAPTLLALLALLAPLARPARAGCPERELER
REEEANVVLTGTVEEIMNVDPVHHTYSCKVRVWRYLKGKDIVTHEILLDGGNKVVIGGFG
DPLICDNQVATGDTRIFFVNPAPQALWPAHRNELMLNSSLMRITLRNLEEVEHCVEEHRK
LLADKPNSYFTQTPPPPRDGCRGMLCGFGAVCERSPSEPGQASCVCKKGPCAPVVAPVCG
SDHSTYSNECELDRAQCNQQRRIKVVSKGPCGSKDPCAEVTCSFGSTCVPSPDGQGARCV
CPSSCSGVAESPVCGSDGRDYRSQCHLNKHACDKQENVFKKFDGPCDPCQAVPSEPGRVC
RVNPRTRRAELLPRPEGCPPGRDPVCGDDGVTYESECAMARSGAIRGMDIQKVRSGQCQP
QDQCPEPCRLGAVCLNRRGAARCSCERIACDGAFRPLCARDGRTYGSDCQRRRAECLQQQ
HIPTRHGGPCDLGAPSPCLSVECSFGATCVVKNQEAVCECQQQCQGRYDPVCGTDQRSYG
SPCELQAMACLLQRDIGVKHKGPCEPCGKCQFGAICEAETGRCVCPTECVPSAQPVCGTD
GNTYGSECELHVRACTQQKDILVAAQGHCKSCGSSVCSFGSRCVAGQCLCPRCQRQPPAP
VCGTDGVTYGSPCQLQEASCQLQKSIEVARMGPCEDECGSGGSGSGDGSECEQERCRHFG
GWWDEDAEDEPCVCDFTCVAVPRSPVCGSDGVTYGNECELKKTRCEKRQELLVTSQGACR
ALATTPPPLLVVHCSQSVYGCCPDNVTLALGVGAAGCPSTCQCNPYGSYGGSCDPGTGQC
SCKPGVGGLKCDRCEPGFWNFRGIVTDGRSGCTPCHCDPVGSVRDDCEQMSGLCSCRTGI
TGMKCTQCPDGSSLGTTGCHKDPSAPRSCKELSCDFGASCVELNGFAHCECPSPLCPEAN
TTKVCGSDGVTYGDQCQLRTIACRQGQHITVKHVGQCHESITHTSPPVPPTPLPTVPPEL
PAPPGATPRSPLPTGAATSPSLPPARPTERGHPTTRRVTTARPATTTAWVTHGAHKATIR
PLATVPVVAATSQPGYSESGSAEGSGDQDMGASGDQEASGAGSAGEEEPDEGQVPPTPAI
ERATCYNSALGCCSDGKTAAADSEGTNCPATKVFQGVLILEEVEGQELFYTPEMADPKSE
LFGETARSIESALDELFRGSDVRKDFRSIRVRDLGQSSAVRVIVEAHFDPATSYTATDVQ
GALLKQLRAAKRKTILVKRPQQEHIKFMDFDWIPRLFTTTVTTTTATTMAPGTTRRAPAA
TAALGQHGEPGGSTHSPGSTHSPGGSTHSPGTTRSPGSSRRMKPTQLPPGTALARPCESQ
PCLHGGTCQDDGHHFTCSCPAGTGGALCEKSPGGSVPSFGGSSVLAFRTMRAYHTVRISL
EFRALEPQGLLLYNAQRHGKDFISLALLGGFVELRFDTGSGTGTVTSRVPVEPGRWHRLL
VTRNRRMGTLAVDGEPPVSGHSPPGTDGLNLDTELFIGGVPHEHMALVAERTGATSGLRG
CVRALAINNRGHELHQGSNDVLYATAVGQCGTDPCQPSPCHHGGTCHAREADMFHCQCPE
AYTGPTCAFERNPCEPSPCHASATCLVLPAGGALCACPVGREGDLCERVTEQDQSVPFLP
EFNGFSYLELNGLQSFVPDLQDKMSMEVVFLAKKPSGMIFYNGQKTDGKGDFVSLALHEG
HLEYRYDLGKGPALLRSKEPVPLNTWVSVLLERSGRKGVLRVNNGHRVTGESPKSRKVPH
MVLNLKEPFYVGGAPDFSRLARAAAISSGFEGAVQRISVGGVPVLKEQNIRSAREVSPFR
GHPCTQKPNPCQHGGSCSPSLGSYQCSCHRGFSGAHCEKVIIEKAAGDTEAVAFDGRTYL
EYHNSITKSHLSNEIPAPEALDFPSEPSEKALQSNHFELSIKTEATQGLLLWSGKGLERS
DYIALAIVDGRVQLSYDLGSKAVTLRSSVPVNTNQWVHIRASRVQREGSLQVGNEAPIAG
SSPLGATQLDTDGALWLGGLDKLSVPQRLPKAFSTGFVGCMRDVLVDRRELHLLEDALNQ
PRILHCSAK
NT seq
6510 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatctgcgcgctttcttcccgggccacggcagcgagcgccgagcgccttccagat
ctcctcctcctcctcctcctcctcctgggattttcctccttctcccctcccctcgctgcc
tccctttccctccctcccctctctttctttcctccttttcacctccctggaacaaaagtg
gccctttcggctgctgcgccagcgctgcctgcgagcggggccgctttgtctgccgggccc
ggcggcaccgccaccgccatggggccgcggctggcaccgacgctgctggcgctgctggcg
ctgctggcaccgctggcacggccggcccgggccggctgccccgagcgggagctggagcgc
cgcgaggaggaggccaacgtggtgctgacgggcacggtggaggagatcatgaacgtggac
ccggtgcaccacacctactcgtgcaaggtgcgggtctggcgctacctgaagggcaaggac
atcgtcacccacgagatcctgctggacgggggcaacaaggtggtgatcgggggcttcggg
gaccccctgatctgcgacaaccaggtggccacgggggacacgcgcatcttcttcgtcaac
cccgcgccgcaggcgctgtggccggcgcaccgcaacgagctcatgctcaactccagcctg
atgcgcatcaccctgcgcaacctggaggaggtggagcactgcgtggaagaacataggaag
cttctggccgacaaacccaacagttacttcacgcagacgccgccgccaccgcgggatggg
tgccgggggatgctgtgtggcttcggggccgtgtgcgagcgcagcccctcggagccgggc
caggcctcgtgcgtgtgcaagaagggtccctgtgcccccgtggtggccccggtgtgcggc
tccgaccactccacctacagcaacgagtgcgagctggacagggcccagtgcaaccagcag
aggaggatcaaagtggtcagcaagggaccctgcggctccaaggacccctgtgccgaggtc
acctgcagctttggcagcacgtgtgtcccctcccctgacggccagggcgcccggtgcgtg
tgtccctcgtcgtgcagcggcgtcgccgagagccccgtgtgcggcagcgacggccgcgac
taccgcagccagtgccacctcaacaagcacgcctgtgacaagcaggagaacgtcttcaag
aagttcgatggcccctgtgacccgtgccaggccgtgccgagcgagccgggccgcgtgtgc
cgggtgaatccgcggacgcggcgggcggagctgctgccccggcccgagggctgtcccccg
ggcagggaccccgtgtgcggcgacgacggcgtcacctacgagagcgagtgcgccatggcc
cgctcgggggccatccgcggcatggacatccagaaggtgcgctcggggcagtgccagcct
caggaccagtgcccggagccgtgccggctgggcgccgtgtgcctgaaccggcgcggggcc
gcgcgctgctcctgcgagcgcatcgcctgcgacggcgccttccggcccctgtgcgcccgc
gacggccgcacctacggcagcgactgccagcgccggcgcgccgagtgcctgcagcagcag
cacatccccacccgccacggcgggccctgcgacctgggtgctcccagcccctgcctgagc
gtggagtgctccttcggggccacgtgcgtggtgaagaaccaggaggccgtgtgcgagtgc
cagcagcagtgccagggccgctacgaccccgtgtgcggcaccgaccagcgcagctacggc
agcccctgcgagctgcaggccatggcctgcctgctgcagagggacatcggcgtcaagcac
aaggggccctgcgagccctgcgggaagtgccagtttggtgccatctgtgaggcagagacg
gggcgctgcgtgtgccccaccgagtgcgtgccctcggcgcagcccgtctgcggcaccgac
ggcaacacctacggcagcgagtgcgagctgcacgtcagggcctgcacccagcagaaggac
atcctggtggctgcccagggccactgcaagtcgtgtggcagctccgtgtgctcctttggc
agccgctgcgtggccgggcagtgcctgtgcccgcgctgccagcgccagcccccggccccc
gtctgcggcaccgacggcgtcacctacggcagcccctgccagctgcaggaggcctcgtgc
cagctgcagaagagcatcgaggtggccaggatgggaccttgtgaggacgagtgtggctca
ggaggctcaggctcgggggatggcagtgagtgtgagcaggagcgctgccgccacttcggg
ggctggtgggatgaggatgccgaggacgagccctgtgtctgtgacttcacctgcgtggcc
gtgccccgcagcccggtgtgcggctctgacggcgtcacctacggcaacgagtgcgagctg
aagaagacgcggtgtgagaagcgccaggagctcttggtcaccagccagggagcctgccgg
gccctggccaccaccccgccacccctgctggtcgtgcactgcagccagagcgtctacggc
tgctgccccgacaacgtcaccctggcgctgggcgtgggagctgctggatgtcccagcacg
tgccagtgcaacccctacggctcctacggtggctcctgtgacccgggcacggggcagtgc
tcctgcaagcccggcgtgggcggcctcaagtgcgaccgctgcgagcccggcttctggaac
ttccgcggcatcgtcaccgacggccgcagcggctgcaccccgtgccactgtgaccccgtg
ggctcggtgcgggatgactgcgagcagatgtcggggctgtgctcctgcaggacgggcatc
acgggcatgaagtgcacccagtgccccgacggcagcagcctgggcaccacgggctgccac
aaggacccctcagcccccaggtcgtgcaaggagctgagctgtgacttcggggcctcgtgc
gtggagctgaacggcttcgcccactgcgagtgcccgtccccgctgtgccccgaggccaac
accaccaaggtgtgtggctctgatggtgtcacctacggggaccagtgccagctgcggacc
atcgcctgcaggcagggccagcacatcacggtcaagcatgtggggcagtgccatgagtcc
atcacccacacgagccccccggtgccccccacgccgctgcccacggtgcccccggagctg
cccgcgccccctggggccaccccgcggtcccccctgcccaccggggcggccaccagcccg
tccctgccgccagccaggcccacggagcggggccaccccaccaccaggcgtgtgacaacg
gccaggccggccaccaccacggcctgggtcacccacggcgcgcacaaggccaccatccgc
ccgctggccactgtccccgtggtggcggccaccagccagcccggctacagcgagtccggc
agcgccgagggcagcggggaccaggacatgggcgccagcggggaccaggaggccagcggg
gcaggatctgctggcgaggaggagcctgacgagggccaggtgccacccacgcctgccatc
gagagggccacgtgctacaacagcgccctgggctgctgctccgacggcaaaaccgcagcc
gccgacagcgagggcaccaactgccccgccaccaaagtgttccaaggagtgctgatcctg
gaggaggtggagggccaggagctgttctacaccccagagatggccgaccccaaatccgag
ctcttcggggagacggcgcggagcatcgagagcgcgctggacgagctgttccggggttct
gatgtcaggaaggatttcaggagcatccgagtgcgggacctgggccagagcagcgccgtc
agggtcatcgtggaggctcactttgacccagccacgtcctacacggccactgatgtccag
ggggccctgctgaagcagctccgagctgccaagagaaaaaccatcctggtgaagaggccc
cagcaggagcacatcaaattcatggactttgactggatcccccggctcttcaccaccacc
gtcaccaccaccacggccaccaccatggcccctggcaccacgcgcagggcgcccgcggcc
accgcggccctggggcagcacggcgagcccgggggcagcacccacagccctggcagcacc
cacagccccgggggcagcacccacagccctggcaccacccgcagccctggcagcagcagg
aggatgaagcccacccagctgccccctggcacggccctggcacggccctgcgagtcccag
ccctgcctgcacggtggcacctgccaggacgacgggcaccacttcacctgcagctgcccc
gcgggcacaggaggggctctctgtgagaaatccccgggcgggtccgtgcccagtttcggg
ggctcctcggtgctggcgttccggaccatgcgcgcctaccacacggtcaggatctccctg
gagttccgcgcgctggagccccaggggctgctcctctacaacgcccagcgccacggcaag
gacttcatctcgctggcgctgctcgggggcttcgtggagctcaggtttgacacgggctct
ggcacgggcacggtcaccagccgcgtgccggtggagccggggcgctggcaccggctgctg
gtgacgcggaaccggcgcatggggacgctggccgtggacggggagcccccggtgagcggg
cacagccccccgggcaccgacgggctcaacctggacaccgagctcttcatcggcggagtg
ccccacgagcacatggcgctggtggcggagcgcacgggtgccacgagcggcctgcggggc
tgcgtgcgggccctggccatcaacaaccgcgggcacgagctgcaccagggctccaacgac
gtcctgtacgccacggccgtgggccagtgtggcaccgacccctgccagcccagcccctgc
caccacggcggcacctgccacgccagggaggccgacatgttccactgccagtgccccgag
gcctacacgggccccacgtgtgccttcgagaggaacccgtgcgagccctctccgtgccac
gcctctgccacctgcctggtgctgcccgccgggggggccctgtgcgcctgccccgtgggc
cgtgagggggacctgtgcgagcgagtgacagagcaggaccagtccgtgcccttcctgccc
gagttcaacggcttctcctacctggagctcaacgggctgcagagctttgtgcccgacctg
caggacaagatgtccatggaggtggtgttcctggccaagaagcccagcgggatgatcttc
tacaatggccagaagaccgatggcaaaggggactttgtgtccctggcactgcacgagggc
cacctggagtacagatacgacctgggcaaagggccagccctgctcaggagcaaggagccc
gtgcccctgaacacgtgggtcagtgtcctgctggagaggagcggccgcaagggcgtcctg
agggtcaacaacggccacagggtgacaggggagtccccgaaatcccgtaaggtgcctcac
atggtgctgaacctgaaggagcccttctacgtggggggagcccccgacttctccaggctg
gcccgagcagctgccatctccagcggcttcgagggagctgtgcagaggatctccgtgggt
ggcgtgcccgtgctgaaggagcagaacatccgcagtgccagggaggtgtccccattccgg
gggcacccctgcacccagaaacccaacccgtgccagcatgggggcagctgcagccccagc
ctgggcagctaccagtgctcctgccacaggggcttctcgggggcacactgcgagaaggtg
atcatcgagaaggcagccggggacaccgaggccgtggccttcgatggccgcacgtacctg
gagtaccacaacagcatcaccaagagccacctgagcaatgagatcccagctcccgaggcg
ctggatttcccctcggagcccagtgagaaggccctgcagtccaaccactttgagctgagc
atcaagacggaggcgacgcaggggctgctgctgtggagcgggaaggggctggagcgctcg
gattacattgccctggccatcgtggacggccgcgtgcagctcagctacgacctgggctcc
aaggccgtcaccctgcgctccagcgtgcccgtcaacaccaaccagtgggtgcacatcagg
gcctccagggtgcagagggaaggctccctgcaggttgggaacgaggcccccatcgccggc
tcctcgcccctcggggccacccagctggacacggacggggcgctgtggctggggggcctg
gacaagctgagcgtgccccagcgcctgcccaaggcgttcagcacgggtttcgtgggctgc
atgcgggacgtgctcgtggaccggcgggagctgcacctgctggaggatgccctgaaccag
ccccggatattgcactgctcggccaaatga
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