Agelaius tricolor (tricolored blackbird): 139601785
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Entry
139601785 CDS
T10815
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03440
Homologous recombination
atrc03460
Fanconi anemia pathway
atrc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139601785 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
139601785 (BRCA1)
03460 Fanconi anemia pathway
139601785 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atrc01009
]
139601785 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atrc04121
]
139601785 (BRCA1)
03036 Chromosome and associated proteins [BR:
atrc03036
]
139601785 (BRCA1)
03400 DNA repair and recombination proteins [BR:
atrc03400
]
139601785 (BRCA1)
Enzymes [BR:
atrc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139601785 (BRCA1)
Protein phosphatases and associated proteins [BR:
atrc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139601785 (BRCA1)
Ubiquitin system [BR:
atrc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139601785 (BRCA1)
Multi subunit type E3
BRCC complex
139601785 (BRCA1)
Chromosome and associated proteins [BR:
atrc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
139601785 (BRCA1)
DNA repair and recombination proteins [BR:
atrc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
139601785 (BRCA1)
BRCA1-A complex
139601785 (BRCA1)
BRCA1-B complex
139601785 (BRCA1)
BRCA1-C complex
139601785 (BRCA1)
BRCA complex
139601785 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
139601785 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
BRCT_2
zf-RING_UBOX
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-Nse
zf-RING_6
zf-RING_5
zf-RING_10
BRCT_3
Zf_2nd_IFT121
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
139601785
NCBI-ProteinID:
XP_071307165
LinkDB
All DBs
Position
Unknown
AA seq
1774 aa
AA seq
DB search
MDFSVITIGQVQNVLSAMQKNLECPICLDVVQEPVSTKCDHIFCRFCMFKLINKKKKGVV
ECPLCKTEVTKRSLKENSRFKQLIEGLLETIHAFELDTGVKFLKSHHFPKTSTDAAAAES
LGKESSVIQSKGFRNRRKSAKGNGQENFTLEASVNIQLADAKMCHPRNQPQKSGSQKGTY
VEFGSESSEEFFKQATKTGFEDKGAVQISPQVRLEELEKKGNENSCHAQPDKLGAKEITL
PGEGDFSEECLSKKSSQSITECAKPDQVNVAGCQSSPWDALAVELLPEQCDRAGGASPTL
NGDTSLSKSTEEMEQQQRQHSSENQESGLEDGSEKRLDKSREMDTDVQSVEAAEGYEPEN
DSSQDKELLPQAEPLDSAPLNKVSTKRLKQSIQKVNEWFSKSNEILSASSSGEESAASAD
VSGEGDLGLSDKESCVSGRTDPMAESMGIAAVEGKKRWSKQTAENIKDKIFGRTYKRGRK
SNPPSTLRDVLPARQKEDVAAAQCLKDFSKDRLKRKRKTARVLQPEDFIKKKDTGKADGG
PQSGNGGLGDAGKKSCDENVAANESHLSQNRANNPLTEPEQGGEPTWKKAAEKVPTQHCD
GEAEMYNCDQKSTKRRSSAAKRCRHSSRTMCALQLVVDRGSGFPDAAEPQIDSYPSSGEP
RKAGPEQKPGRHSRRLQLLSEEMAKETREGVKGGRNNSDHGRSVSGDQGSVAARSAEGTD
LGEPQEELSYRPVTNLEGGDLQANEVQVNLRNLSGTAGTAKSLFSPSCLPSNCASTVPDT
GSQDSKILGSPLLLQLPSVSAGQTASPQTEEVTGSATASPPQCGHDSQRVPGDFKADKLP
VAKTVLELSKEAEDSDLDTQYLRNIFRHSKRSSFSLFHTRAMADPPSETFNLSCAAQVEN
KASKQLQPESLQEEKTAAQNLSRASEKDEEEEKLKTCESAHVDPVPCFAVSTGEHRGDIS
QAAEEGTLTPARAGTAQAEHKEGLMQEEQGNEKPVSNETGIESELRQNPTESDGSQSDQS
NTEEHESRQNDLNTGQENSFSSDSNQAGKTEVVDCTEPILHFQSTSMTCSATCQQSPAEL
TRTKSSKRERKCAKGDEEEAAQTVSTAAEALEEPLGENGGLTGLSESPNALLCSDSDTEE
SSSFCDIDRKEQSAVFVKSASAELQSRNAHSKPRARRRVQKLPSSDEEDEDEELPCFGTF
IFSKSASTPVQGEKQGAPVGAECPGSPGVQPLRVRNGGSVVQKVPEAALSHACASPSQES
ECSVNLFSSQSNMSEESLNGAQELNKHLPQAQVSKPMSNASERKETSQNSSGGLKETKDE
SQEDPDMGANLGEASGSDSEISIVEDSCGAFSQGEILTTQQKNAMQNSLKKLQQEMAALE
AVLKQNGSQNCGVLPVQRELPHSSTEEGSEMDQTREEKDKSPELLLSASKSSLRKRSDLE
KGLECARAPQNKTPSEKTKPEQEHRQCQLGAENAEEQNSGTRQSSASVSSDLFGNGTQSP
ENSSSSVRPLTPHTAEATAGPAVAQSTGKSSGPGHKLKKSEFSPGPVLHNATGKENAANP
VGTKRKEMSIVVSGLNHSEHLVVQKFVKKTQSTLSNHITEGTTHVIMKTDEELVCERTLK
YFLGIAGGKWVLGYQWIIQSFKAGRILDEEHFEVRGDVINGRNHQGPRRARQALTEKIFK
GFEICCCGPFTDMTTEHLEWMVELCGASVVKQPDLLTATANSTAVVVVQPDAWKENTDYG
AIQQQSSVALVTREWVLDSVACYQCQELSAYLVS
NT seq
5325 nt
NT seq
+upstream
nt +downstream
nt
atggacttctcagtgattactattggacaagtacaaaatgtgctttctgctatgcagaag
aacttggagtgcccaatatgcctggacgtggtgcaagagcctgtttcaacaaaatgtgat
cacattttctgcagattctgcatgttcaaacttatcaacaaaaagaaaaaaggtgtggtg
gagtgtcctctgtgtaagactgaagttaccaagagaagtctgaaagaaaattccagattt
aagcagctcattgaaggactgttggaaactatccatgcttttgagcttgacactggagtg
aagtttttaaagagtcatcactttcccaaaacatccacggacgccgctgctgctgagtcc
ctgggtaaagaaagttctgtcatccaaagtaagggcttcagaaacaggaggaaaagtgct
aaaggaaatgggcaagaaaacttcaccttggaagctagtgtgaatattcagctggcagat
gccaaaatgtgtcacccaagaaaccaaccccagaaatctggttctcaaaagggcacttat
gtggagtttggctctgaatcatctgaagagttttttaaacaggcaaccaaaactgggttt
gaagacaaaggagctgttcagatttctcctcaagtcagactggaagaacttgagaagaaa
ggcaatgaaaattcttgtcatgcacagcctgacaagctgggtgccaaggaaataacactg
ccaggtgaaggtgatttctcagaggaatgtttgagcaagaaaagctctcagagcatcact
gaatgtgccaaacctgaccaggtgaatgtggctgggtgccagagttctccttgggatgct
cttgctgtggagctgctcccagagcagtgtgacagagcagggggtgccagtcccaccctg
aatggggacacatcactctctaagagcacagaagaaatggagcaacagcaaaggcagcac
agcagtgaaaaccaagagtctggtttagaagatggctcagagaagaggctggataaaagc
agggaaatggatactgatgtacaaagtgtggaagctgcagagggatatgagcctgagaat
gactcctcccaggacaaagaacttttacctcaggcagagccacttgactctgcccccctg
aataaagtctccacaaagagactgaagcagagcattcagaaagtcaacgaatggttttcc
aaaagcaacgagatcctgtctgccagttcttcaggggaggagtctgctgcatcagctgat
gtttcaggtgaaggagatctgggtttgtcagataaagagtcctgtgtttcaggaaggact
gaccctatggcagagtccatgggaattgcagcagtggaaggaaaaaaaaggtggtcaaaa
caaacagcagaaaacatcaaagacaaaatatttggcaggacatacaagagagggaggaaa
tcaaatcccccttctaccttgagagacgttttgcctgctagacaaaaggaagatgtggct
gctgctcagtgcctgaaggatttcagcaaggacagactcaaacgaaagaggaaaactgcc
cgtgtcctgcaacctgaggatttcatcaagaaaaaagatacaggaaaggcagatgggggc
cctcaaagtggcaatgggggccttggagatgctggaaagaaaagctgtgatgaaaatgtg
gctgctaatgagagtcacctctcccagaacagagcaaataatccattgacagaacctgag
caaggaggagagcccacatggaaaaaagctgctgagaaggtccctacccagcactgtgat
ggggaagcagaaatgtataactgtgatcagaaaagcaccaaaaggagaagttctgcagca
aaaagatgcaggcattctagcagaaccatgtgtgccctgcagttggtggtggacagaggc
tctggttttcctgatgcagctgagccacagattgacagctacccaagcagtggagagccc
aggaaagctggtcctgagcaaaagccaggcagacacagcagaaggcttcagttactctct
gaggaaatggcaaaagaaacaagggaaggagtaaagggaggcagaaataacagtgatcat
ggaaggtctgtctctggagaccaggggagtgtggcagctcgctctgctgagggcactgac
ctgggtgagcctcaggaggagctgagttacaggccagttactaatttggagggaggggat
ctgcaggcaaatgaagtgcaggttaatctaaggaatttatctggcactgcaggaactgca
aagagtctgttcagtccttcatgtctgccttcaaactgtgcttccactgtgcctgataca
ggttctcaagacagtaaaatacttggtagccccctcctcctgcagcttccttcagtgtct
gctgggcaaactgcttctccccagactgaggaggtgactggatcagccactgcttctccc
ccacaatgtgggcatgattcacaacgtgttccaggggatttcaaagctgacaagttgcca
gtggctaaaactgttttggaattgtctaaggaagctgaagacagtgacttggacacacaa
tatctgaggaacatattcaggcattccaagcgctcctccttcagcctttttcacactcgt
gccatggcagatcctccttctgaaaccttcaatctgtcatgtgctgctcaggtagaaaat
aaagctagcaaacaattacaaccagaaagcttgcaagaggagaaaacagctgctcaaaac
ctgagcagggcttctgagaaagatgaagaggaagagaagcttaagacctgtgagtctgca
catgttgatcctgtgccttgctttgctgtcagcacaggggagcacaggggtgacatttca
caggctgcagaggaagggactctgacaccagcaagggcagggactgctcaggctgagcac
aaagagggattgatgcaagaagagcagggcaatgaaaagccagtgtcaaatgagacaggg
atagaaagtgagctgagacagaatcccactgaaagtgatggaagccagagtgatcagagt
aacacagaggagcatgaatccagacaaaatgatttaaacacaggccaggaaaacagcttc
agttcagatagcaatcaggcaggaaagactgaagttgttgattgcacagaaccaattcta
cattttcaatccacatcaatgacttgttctgcaacttgtcagcaaagccctgctgaactc
actaggacaaaaagtagcaaaagagaaagaaaatgtgcaaagggggatgaagaagaagca
gcccaaactgttagcacagctgcagaggctctggaagaacctcttggagaaaatggtggc
cttacaggtttgtctgaaagccccaatgccttgctgtgctctgatagtgacactgaggag
agctccagcttctgtgacattgataggaaggagcaatctgcagtgtttgtaaaaagtgcc
agtgcagagctgcagagtaggaatgcacattctaaaccaagagctcgcaggcgggtgcag
aagctgccatcttcagatgaagaggatgaggatgaggagttgccctgctttgggacgttc
atcttcagcaaatcagccagcacacctgtgcagggtgagaaacaaggggcacctgtgggg
gcagagtgcccagggagccccggggtgcagcctctcagggtcaggaatggtggcagtgtt
gtgcagaaggtgccagaagctgccctgagccatgcctgtgcttcaccaagccaggagtca
gaatgctctgtcaacttgttttcttcccagtccaacatgtctgaagagtcacttaatgga
gcacaagaactgaacaaacatttaccacaagctcaggtgtccaaaccaatgagcaatgca
agtgagaggaaagaaacttctcagaattctagtggagggctgaaggaaaccaaagatgaa
agccaagaggacccagacatgggagcaaacctaggtgaagcatctggatctgacagtgaa
ataagtattgtagaagattcctgtggggcattctctcagggtgagatcctcactacacag
caaaagaatgctatgcaaaatagcctgaaaaagcttcagcaagaaatggctgcacttgaa
gcagtgctgaagcagaatgggagccagaactgtggagttttacctgtccagagggagctg
ccacattccagtactgaagaaggatctgaaatggatcaaacaagagaagaaaaagacaag
tccccagaattgctgctttcagcttctaaatcctctttaaggaagagatcagatctggag
aaaggccttgagtgtgccagggctccacagaacaaaactccctctgaaaagacaaaacct
gagcaggagcacaggcagtgtcagcttggagcagaaaatgcagaggagcagaactctggg
accaggcaaagcagtgcatctgtctcatcagatctttttggaaatgggacccagagtcca
gagaattcttcctcctctgtaaggcctttaacccctcacactgcagaagccacagctggg
cctgctgtggctcagagcactgggaaaagctctggcccaggacacaaattgaaaaaaagt
gaattttctcctggacctgttctgcacaatgcaactgggaaagaaaatgctgcaaatcca
gtggggaccaagaggaaagaaatgtcaattgtggtctcaggtctaaatcacagtgagcat
ttggtggtccagaagtttgtgaaaaaaactcagagcactttatccaatcacattactgaa
ggaacaacccatgtcatcatgaaaacagatgaggagctggtgtgtgaacggaccctgaag
tatttcctgggcattgcaggaggaaaatgggtgcttggttatcagtggataattcagtct
tttaaagcaggaagaatactggatgaggagcactttgaagtcagaggagatgtcatcaat
gggagaaaccatcaggggcccaggagggccagacaggccctgactgaaaagatctttaaa
ggctttgagatctgttgctgtgggcccttcactgacatgactacagagcatctggagtgg
atggtggagctgtgtggtgcctctgtggtgaagcagcctgacctgttgacagccacagct
aattctactgcagttgtggttgtgcagccagatgcttggaaggaaaacacggattatgga
gcaatccagcagcagagcagcgttgccctggtaactcgggagtgggtcctggacagcgtg
gcttgctaccagtgccaggagctcagtgcttacctcgtgtcctga
DBGET
integrated database retrieval system
