Agelaius tricolor (tricolored blackbird): 139602016
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Entry
139602016 CDS
T10815
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc00514
Other types of O-glycan biosynthesis
atrc04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
139602016 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139602016 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
atrc01003
]
139602016 (RFNG)
Enzymes [BR:
atrc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
139602016 (RFNG)
Glycosyltransferases [BR:
atrc01003
]
Glycan extension
O-Glycan
139602016 (RFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
DUF1180
Motif
Other DBs
NCBI-GeneID:
139602016
NCBI-ProteinID:
XP_071307576
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MSGPCLGLRRAGVLLSLGAAALLLLLLPRGPRPAAPRPPCPAGPSAAPPHRAGPAGSAGA
PGGGPGAGGLAGSSQLARRGRLGTAGSAARESLELKDIFIAVKTTRKYHRSRLDLLLQTW
ISQARGQTFIFTDWEDRELRLKAGDHMINTNCSAVHTRQALCCKMSVEYDKFLESGQKWF
CHVDDDNYVNPRTLLHLLSAFSHSQDVYVGRPSLDHPIEAADHVQSDGSKTTVKFWFATG
GAGFCISRGLALKMSPWASLGNFISTAERVRLPDDCTIGYIIEGLLEVKLLHSPLFHSHL
ENLQRLQGESVLQQVTLSYGDPENKHNVVSVGGVFGLQQDPTRFKSVHCLLYPDTIWCPA
KKMS
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtccttgcctagggctgcgcagggccggggttctgctgtcgctgggagccgcc
gcgctcctgctgctgctgctgccgcgggggccgcgccccgccgcgccccgcccgccgtgc
cccgccgggcccagcgcggccccgccgcaccgcgcgggccccgccggctctgccggagcg
ccgggcggcgggcccggggccggcgggctcgcggggagctcgcagcttgcgcggaggggc
cgcctcgggactgccggcagtgcggccagggagagcctggagctgaaggacatcttcatt
gccgtgaagaccacgaggaaataccataggagccggctggacttgctcctccaaacctgg
atctcccaggcgagaggacagacatttatattcacggactgggaggatcgggagctacgc
ctgaaagcaggggatcatatgatcaacaccaactgttctgctgtccatacccgacaagct
ctctgctgcaagatgtctgtggaatatgataaattcctggaatctgggcaaaaatggttt
tgccatgtggatgatgacaactatgtgaaccctcggactcttctgcatctcttgtctgcc
ttctcacacagccaggacgtgtatgtggggcgaccgagcctggaccatcccatcgaagca
gctgaccatgtccaaagtgatggatcaaagacaacggtgaaattctggtttgccacaggc
ggagctgggttctgtatcagccgaggtcttgccctgaagatgagtccctgggccagcctg
ggcaatttcattagtactgcagaaagagtacgtcttcctgacgactgcaccattggctac
atcatcgaagggctgctggaggtaaagctgctgcacagcccattgttccactcccacctg
gaaaatctgcagagactgcaaggggagtctgtgctgcagcaggtaaccctgagttacggt
gaccctgagaacaaacacaatgtcgttagcgtgggaggagtgtttggccttcagcaagat
ccaactagatttaaatctgtccattgtctgctttaccctgacactatctggtgccctgct
aagaagatgtcataa
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