Agelaius tricolor (tricolored blackbird): 139604175
Help
Entry
139604175 CDS
T10815
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03450
Non-homologous end-joining
Brite
Enzymes [BR:
atrc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
139604175 (LIG4)
DNA repair and recombination proteins [BR:
atrc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
139604175 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139604175
NCBI-ProteinID:
XP_071311319
LinkDB
All DBs
Position
Unknown
AA seq
912 aa
AA seq
DB search
MASAPVSQPPPKKTVASHVPFADLCSTLERIQKSKTRPEKTKYFKDFLDSWRKFHDALHQ
KEKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLSLPKDGKDAAKLLNYRTP
TGSRGDAGDFAMIAYFVLKPRSPKQGRLTIEQVNEHLDAIANNNAAKNKGQLKKSLLQLI
TQSTALEQKWLIRMIIKDLKLGVSQQTIFSIFHPDAAELHNVTTDLEKVCRQLHDPTVSL
SDVSIMLFSAFKPMLAAIADVQQIEKQMSNQTFYIETKLDGERMQMHKDGDVYKYFSRNG
FDYTQQFGASPLEGSLTPFIHNVFKSNIQNCILDGEMMAYNPEAQTFMQKGNKFDIKRMV
EDSDLQTCFCVFDVLMVNDQKLGHEVLSKRYEILSSVFTPVKGRIHVVHKRSARTRKEVI
DALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVSGLMDELDLLIVGGYWGKGS
RGGMMSHFLCAVAEMPPPNEKPTIFHSICRVGSGYTMKELYDLGLKLAKHWKPYNRKDPP
GNILCGAEKPEMYIEPCNSVIVQIKAAEIVDSDMYKTDCTLRFPRIEKIREDKEWYECMT
SDMLEDLRSKAQGKLASKHLHIDEYDEPHEKKRKTVSKVRKVIGIAEQFKAPDLSSVSKV
SNVFEDVEFCVMTGIGKYSKSELESRIAQCGGSVVQNPGPETYCVIVGAENVRVKNVIAS
NKYDVVRAEWLLQCFETKMLVPWQPAFMIHMSPDTKEHFAREYDCYGDSYTANTDVVQLK
EVFSRMKDNKAMPLDLIAELEERYWCGSCQLGIFRGSTIYVDCYAVVNEPQSKIPGTTLS
IRALELRFYGAEVVSHLEEGVSHVVVGEDCSRVQEMKALRRTFGKKFKIVSELWVTHSVE
EGVAKNENQYLI
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgcacctgtttcacagcctcctcctaaaaaaacggtggcctctcacgtgcct
tttgcagatctctgttctactctggagcgaatacagaagtccaaaactcgtccagagaaa
accaagtatttcaaggattttctggattcctggaggaaattccatgatgcactccatcaa
aaagagaaagatgtcacagattccttttacccagctatgcggctcattctcccacagttg
gaaagagaaaggatggcatatgggattaaagaaactatgcttgcaaagctctatattgaa
ctgcttagtttaccaaaagatggaaaagatgctgcaaagcttttaaattacagaacacct
acgggctcacgtggagatgctggggattttgcaatgatcgcctactttgtgctaaagcct
aggagcccaaaacaaggcagactgacaatagaacaagttaatgaacatttagatgcaatt
gccaataataatgctgctaaaaacaaaggtcagttaaagaaaagtcttctgcagttaatt
acccagagcacagcactggaacaaaagtggcttatccgaatgattataaaggatctaaag
cttggtgttagtcaacaaactatattttcaatttttcatcctgatgctgctgaattgcac
aatgttactactgacttggaaaaagtttgcagacagctgcatgatcccactgtctcgctt
agtgatgtttctatcatgttgttttctgcctttaaaccaatgcttgctgctattgcagat
gtccagcaaattgagaaacaaatgagtaaccagacattctacatagaaacgaagctggat
ggtgaacgtatgcagatgcacaaagatggggatgtgtacaagtacttttcccgaaatggg
tttgactatacccagcagtttggtgcttcaccccttgaaggttcattaacgccatttatt
cataatgtatttaagagcaatatacaaaattgcattcttgatggtgaaatgatggcttac
aatcctgaggcacagacttttatgcaaaaaggaaacaaatttgacataaaaagaatggtg
gaggactctgatctgcagacctgcttctgtgtatttgatgtattgatggttaatgatcag
aagttggggcatgaagtactaagcaaaagatatgaaatcttaagtagtgtatttaccccg
gtaaagggcaggatacatgtggtccataagagaagtgccagaacaagaaaagaagtaatt
gatgctttaaatgaagccatagataacagagaggaaggaattatggtgaaagatcccatg
tccacctacaagcctgacaaacgtggggaaggctggttaaaaatcaaaccagaatatgtc
agtgggctgatggatgagctggaccttttaattgttggtggttactgggggaaggggtct
cgtggtggaatgatgtctcattttctatgtgctgttgcagagatgccccctccgaatgaa
aagccgaccattttccactccatttgtcgtgttggctctggctatactatgaaagagttg
tatgatctgggcttgaaactggctaaacactggaagccctacaataggaaggaccctcct
ggtaacattttgtgtggagctgaaaaacctgaaatgtacattgaaccttgcaactctgtc
atagttcagatcaaggcagctgagattgttgacagtgatatgtataaaactgactgtact
ttgagattcccccgaattgagaagataagggaagacaaagaatggtatgagtgcatgact
tcagacatgctagaagacctcagaagcaaagcacaaggaaagctggcatctaagcacctt
catatagatgagtacgatgagccacatgagaaaaaaaggaaaactgtttcaaaggtgagg
aaggtaattggaatagctgagcaatttaaagctcctgatctttctagtgtaagcaaggtt
tcaaatgtatttgaagatgttgagttttgtgttatgacaggaataggaaaatactcaaag
tctgagctggaaagcagaatagcccaatgtggtggcagtgtggtacagaacccagggccg
gagacttactgtgtcattgtaggagctgagaatgtcagagtgaaaaacgtcatcgcttcc
aacaaatacgatgtggtgagggcagagtggctccttcagtgttttgaaaccaaaatgctg
gtgccttggcaaccagcctttatgattcacatgtctcctgacacaaaagaacattttgct
cgtgagtatgattgttatggagacagctacacagcaaacacagatgttgtgcagctcaag
gaagtgttctcaagaatgaaagacaataaggcaatgcctctggacttgattgcagagcta
gaagaacgttattggtgtggcagttgtcagctcggtatattcagaggaagcactatttat
gtggactgttatgctgttgttaatgagccccaaagtaaaatccctggaactacactttca
attagagctttggagctccgtttttatggtgcagaagtagtttctcaccttgaagagggt
gtctcccatgttgttgtgggagaagattgttcacgggtacaagagatgaaagcactcagg
agaacatttgggaaaaaatttaaaattgtatctgagctatgggtaacacactcagtggag
gaaggagttgcaaagaatgaaaatcagtacttaatttaa
DBGET
integrated database retrieval system
