KEGG   Agelaius tricolor (tricolored blackbird): 139604890
Entry
139604890         CDS       T10815                                 
Name
(RefSeq) class II histocompatibility antigen, B-L beta chain-like
  KO
K06752  MHC class II antigen
Organism
atrc  Agelaius tricolor (tricolored blackbird)
Pathway
atrc04145  Phagosome
atrc04514  Cell adhesion molecule (CAM) interaction
atrc04672  Intestinal immune network for IgA production
atrc05164  Influenza A
atrc05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:atrc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    139604890
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    139604890
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    139604890
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    139604890
   05168 Herpes simplex virus 1 infection
    139604890
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:atrc04147]
    139604890
Exosome [BR:atrc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   139604890
  Exosomal proteins of epithelial cells
   139604890
  Exosomal proteins of breast milk
   139604890
SSDB
Motif
Pfam: MHC_II_beta C1-set
Other DBs
NCBI-GeneID: 139604890
NCBI-ProteinID: XP_071312302
LinkDB
Position
Unknown
AA seq 387 aa
MGRGAAAGALLVALVVLGAPPAAGAELSGVFQNMHQYECHFINGTEKVRYVARYIYNREQ
YLMFDSDVGHYVGFTPYGEKHAQYRNSDPEFLEDARTAVDTYCRHNYRITTPFSVERRVP
PNVSISLVPSSSSQPGPGRLLCSVMDFYPAAIQVRWFQGQQELSEHVVATDVVPNGDWTY
QLLVLLETPPRRGLTYSCQVEHVSLEQPLSRHWEMPPDAARSKMLTGIGGFVLGFVFLAL
GLGFYVHKKVRAAPEERSRNQRSSGDPPAFTEVSTRGARKMWSPQPGVFPTRGALTLGVT
RDYPAWILQRGLDLERGTELFPHRGTAGSTGIDPSLIKGQLSVTVVRTTKTVVPHAEIPL
QIHGDAEIPLQPPEQPRWSTGMPERRL
NT seq 1164 nt   +upstreamnt  +downstreamnt
atggggcgaggggcggcagctggggccctactggtggcactggtggtgctgggagccccc
ccggctgcgggcgcggagctctcgggggtgttccagaacatgcatcagtacgagtgtcac
ttcattaacggtacagagaaggtgaggtacgtggcgaggtacatctacaaccgggagcag
tacctgatgttcgacagcgacgtggggcactatgtggggttcaccccctatggtgagaaa
catgcccagtacaggaacagcgacccggaattcctggaggacgcacggactgcagtagac
acgtactgccggcacaactaccggattaccaccccattcagcgtggagcgccgagtgccc
cccaacgtgtccatctcgctggtgccctcctcgagctcccagcccggccccggccgcctg
ctctgctccgtgatggatttctaccctgctgccatccaggtgaggtggttccagggccag
caggagctctcggagcacgtggtggccaccgacgtggtccccaacggggactggacctac
cagctgctggtgctgctggaaacgccgccccggcgcgggctcacctacagctgccaggtg
gagcacgtcagcctggagcagcccctgagccggcactgggagatgccgccggacgccgcc
cgcagcaagatgctgacgggcatcgggggcttcgtcttgggcttcgtcttcctggcgctg
gggctcggcttctacgtgcacaagaaggtcagggcagcccctgaggagaggagcagaaac
cagagaagcagcggagatcctccggccttcaccgaggtgtccacgcggggagccaggaag
atgtggagcccccagccaggtgtgttcccaacgcggggggctctgaccctgggggtcacc
cgggattatccagcctggatcctccagcgggggctggacctggagcggggcacggagctc
ttcccgcaccggggcacggcgggatccacgggcatcgacccctccctcatcaaaggacag
ctttcagttacagtggttaggacaactaaaacggtggtgccccatgcagagatccccctg
cagatccatggggatgcagagatccccctgcagcccccggagcagccacgctggagcacg
gggatgcctgagaggaggctgtga

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