KEGG   Agelaius tricolor (tricolored blackbird): 139604901
Entry
139604901         CDS       T10815                                 
Name
(RefSeq) class II histocompatibility antigen, B-L beta chain-like
  KO
K06752  MHC class II antigen
Organism
atrc  Agelaius tricolor (tricolored blackbird)
Pathway
atrc04145  Phagosome
atrc04514  Cell adhesion molecules
atrc04672  Intestinal immune network for IgA production
atrc05164  Influenza A
atrc05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:atrc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    139604901
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    139604901
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    139604901
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    139604901
   05168 Herpes simplex virus 1 infection
    139604901
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:atrc04147]
    139604901
Exosome [BR:atrc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   139604901
  Exosomal proteins of epithelial cells
   139604901
  Exosomal proteins of breast milk
   139604901
SSDB
Motif
Pfam: MHC_II_beta C1-set
Other DBs
NCBI-GeneID: 139604901
NCBI-ProteinID: XP_071312306
LinkDB
Position
Unknown
AA seq 419 aa
MGRGAAAGALLVALVVLGAPPAAGAELSGVFQRMTKSECYFINGTEKVRYVQRAIYNREQ
FIMFDSDVGHFVGFTPYGEKLAKRWNSNAVFMEDRRTAVDWFCRCWYKNFTPFLTERRVP
PNVSISLVPPSSSQPGPGRLLCSVMDFYPAAIQVRWFQGQQELSEHVVATDVVPNGDWTY
QLLVLLETPPRRGLTYSCQVEHVSLEQPLSRHWEMPPDAARSKMLTGIGGFVLGFAFLAL
GLGFYVRKKVRAGAGGGVPAVAERARSRRGPQPGVTPFSLPTELLSRRRPQPLPVGTELR
TETRENKSLPQNLMEEAIWNGSTAQESNGEEKPQKSHTRRGCKPSLESCEEIHGDAEIPP
QIHGDAEIPLQIHGDAEIPLQPPEQPRWSTGMPERRLCPRGQRGPAGAACPGRTDPGAQ
NT seq 1260 nt   +upstreamnt  +downstreamnt
atggggcgaggggcggcagctggggccctactggtggcactggtggtgctgggagccccc
ccggctgcgggcgcggagctctcgggggtgttccagaggatgacaaagtccgagtgttac
ttcattaacggcacggagaaggtgaggtacgtccagagggccatctacaaccgggagcag
ttcataatgttcgacagcgacgtggggcattttgtggggttcaccccctatggggagaag
ttggccaagcgctggaacagcaacgcggtattcatggaggacagacggactgcggtggat
tggttctgccggtgctggtacaagaattttaccccgttcctcacagagcgccgagttcca
cccaacgtgtccatctcgctggtgcccccctcgagctcccagcccggccccggccgcctg
ctctgctccgtgatggatttctaccctgctgccatccaggtgaggtggttccagggccag
caggagctctcggagcacgtggtggccaccgacgtggtccccaacggggactggacctac
cagctgctggtgctgctggaaacgccgccccggcgcgggctcacctacagctgccaggtg
gagcacgtcagcctggagcagcccctgagccggcactgggagatgccgccggacgccgcc
cgcagcaagatgctgacgggcatcgggggcttcgtcttgggcttcgccttcctggcgctg
ggactcggcttctacgtgcgcaagaaggtcagggcgggtgccgggggtggcgtcccggcc
gtggcggagcgtgcgcgctcccgccggggcccccagcccggtgtcacccccttttctctg
cccacagagctcctgagccggcggcggccgcagcccctccccgtgggcactgagctgcgg
acagagaccagggagaacaaatccctgccacagaacctcatggaagaggccatttggaac
ggctccacggctcaggaatccaatggggaggagaagccccagaaatcccacacgaggagg
ggctgcaaacccagcctggagagctgtgaggagatccatggggatgcagagatccccccg
cagatccatggggatgcagagatccccctgcagatccatggggatgcagagatccccctg
cagcccccggagcagccacgctggagcacggggatgcctgagaggaggctgtgcccccgt
ggccagaggggccccgctggagcagcctgtcctggcaggactgaccccggggcacagtga

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