KEGG   Agelaius tricolor (tricolored blackbird): 139604905
Entry
139604905         CDS       T10815                                 
Name
(RefSeq) class II histocompatibility antigen, B-L beta chain-like
  KO
K06752  MHC class II antigen
Organism
atrc  Agelaius tricolor (tricolored blackbird)
Pathway
atrc04145  Phagosome
atrc04514  Cell adhesion molecules
atrc04672  Intestinal immune network for IgA production
atrc05164  Influenza A
atrc05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:atrc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    139604905
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    139604905
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    139604905
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    139604905
   05168 Herpes simplex virus 1 infection
    139604905
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:atrc04147]
    139604905
Exosome [BR:atrc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   139604905
  Exosomal proteins of epithelial cells
   139604905
  Exosomal proteins of breast milk
   139604905
SSDB
Motif
Pfam: MHC_II_beta C1-set
Other DBs
NCBI-GeneID: 139604905
NCBI-ProteinID: XP_071312310
LinkDB
Position
Unknown
AA seq 331 aa
MGRGAAAGALLVALVVLGAPPAAGAELSGVFQRMTKSECYFINGTEKVRYVQRAIYNREQ
FIMFDSDVGHFVGFTPYGEKLAKRWNSNAVFMEDRRTAVDWFCRCWYKNFTPFLTERRVP
PSVSISLVPPSSSQPGPGRLLCSVMDFYPAAIQVRWFQGQQELSEHVVATDVVPNGDWTY
QLLVLLETPPRRGLTYSCQVEHVSLEQPLSRHWGTGEPLGALAEPLGCAGSHWEGAGESR
AGTGRGARGSALLLWFRLLILISRSSSSCPSSPSSIAPPPSSSRLLPLVSLTSPAPSSSR
SPRALPPPFLPLPLPKSVPSPPPNPLPIAPQ
NT seq 996 nt   +upstreamnt  +downstreamnt
atggggcgaggggcggcagctggggccctactggtggcactggtggtgctgggagccccc
ccggctgcgggcgcggagctgtcgggggtgttccagaggatgacaaagtccgagtgttac
ttcattaacggcacggagaaggtgaggtacgtccagagggccatctacaaccgggagcag
ttcataatgttcgacagcgacgtggggcattttgtggggttcaccccctatggggagaag
ttggccaagcgctggaacagcaacgcggtattcatggaggacagacggactgcggtggat
tggttctgccggtgctggtacaagaattttaccccgttcctcacagagcgccgagtgccc
cccagcgtgtccatctcactggtgcccccctcgagctcccagcccggccccggccgcctg
ctctgctccgtgatggatttctaccctgctgccatccaggtgaggtggttccagggccag
caggagctctcggagcacgtggtggccaccgacgtggtccccaacggggactggacctac
cagctgctggtgctgctggaaaccccgccccggcgcgggctcacctacagctgccaggtg
gagcacgtcagcctggagcagcccctgagccggcactggggtacgggggagcccctgggg
gcgctggcagagccactgggctgtgctgggagccactgggagggagctggagagagccgg
gctgggactgggagaggggccagaggatccgcgctgcttctttggttccggctcctcatc
ctcatctctcgctcctcttcctcctgcccctcctccccctcttccatcgctcctccccct
tcctcatcccgcctacttcccctcgtctctctcacgtcccccgctccttcctcctcccgc
tccccccgggccctgcccccaccctttctccccctccctttgcccaaatccgtcccatca
cccccccccaaccccctccccatcgccccccaataa

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