Amaranthus tricolor (tampala): 130800046
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Entry
130800046 CDS
T09367
Name
(RefSeq) uncharacterized protein LOC130800046 isoform X1
KO
K01855
tRNA pseudouridine38/39 synthase [EC:
5.4.99.45
]
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atri03016
]
130800046
Enzymes [BR:
atri01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.45 tRNA pseudouridine38/39 synthase
130800046
Transfer RNA biogenesis [BR:
atri03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
130800046
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
NET2A
HB_LcnD
Motif
Other DBs
NCBI-GeneID:
130800046
NCBI-ProteinID:
XP_057519365
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All DBs
Position
14:6515187..6540989
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AA seq
436 aa
AA seq
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MEKEQLISALQSQIDSLHCQIKDLEVENAKLTSQLSNCCCTKMEETTNTIVSNDVVSVEN
PQKLGGKSGKNRKTRLQDKNESLLYHYSKRYVALKVMYFGQRFYGFASEAQMEPTVESEL
FRAFEKTRLLIGDRKSSQYSRCGRTDKGVSAAGQVIALYLRSNLIAETSSAGVIFEGRYE
EEIDYVRILNKVLPKDIRIIGWSPVPMTFHARFGCVSREYKYFFWRENLDISAMQTAAKK
FLGEHDFRSFCKMDAVNVHNYKRCITSFNVTPSREKFRDKEIWVITIRGSAFLWHQVRCM
VAILFMIGQGLESAEVVDVLLDIRRTLRKPQYTMAPELPLVLHSCEFEGLRFFSSAVARQ
ALLAHLTNECQNLMLQFAIFHDALDSCLLQDDDEVGASLAKASETKKCPHIPLLMRPTEP
SYEERRTKFKSGSLKQ
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggagcaactcatctctgctctacagtcccaaattgattccctacattgccaa
atcaaggatttagaggttgaaaatgctaaattgacgtcgcaactttcaaattgctgttgc
actaagatggaggaaactactaatactattgtaagtaatgatgtagtttctgttgaaaat
cctcagaagttgggtggaaaaagtggcaagaacaggaaaactaggttacaagataagaat
gagagcttgttgtatcattattccaaaagatacgtagccctgaaagtcatgtattttggc
cagcggttttacggttttgcatcagaggctcaaatggaacctactgttgagtctgaactt
tttagagcttttgagaagacaaggctattaattggtgacagaaaaagttcacagtactca
cgatgtggcagaacagataaaggcgtctcggctgctgggcaagtcattgctctatatcta
cggtcaaaccttattgctgaaacaagttccgcaggagttatttttgaaggacgatatgaa
gaagaaattgattacgtgagaatactaaataaagtactgccaaaagatattcggatcata
ggttggtctccagtgcctatgacttttcatgcgaggtttggctgtgtaagcagggagtac
aaatactttttttggcgtgagaatcttgacatatcggccatgcagactgcagctaagaag
tttctgggtgaacatgactttaggagcttctgtaaaatggatgcagtgaatgtgcacaac
tataagcgatgtattacttcatttaatgtcaccccaagcagagaaaagtttagagacaaa
gaaatatgggtcatcacaattagaggtagtgcattcttatggcatcaggtccgatgcatg
gttgctatattatttatgattggacaaggcctggagtcagcagaagttgttgatgtctta
ctggatatacggaggacactaagaaagcctcaatatacaatggccccggaattgccattg
gttctgcattcttgtgaatttgaaggtctacggtttttttcttcagcagttgcaaggcaa
gcattgcttgctcacctgacaaatgaatgccagaatcttatgctgcaatttgctattttc
catgatgctttggatagctgtttgttacaagatgacgatgaagtaggggcttcacttgca
aaagcttcagagacgaagaaatgtcctcacattcctctgttaatgaggccaactgagcca
tcatatgaagagcgacgcaccaaattcaaatcaggaagcttaaaacaatag
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