Amaranthus tricolor (tampala): 130803629
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Entry
130803629 CDS
T09367
Name
(RefSeq) protein SIEL isoform X1
KO
K13141
integrator complex subunit 4
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atri03041
]
130803629
Spliceosome [BR:
atri03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
130803629
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Cnd1
PDS5
Motif
Other DBs
NCBI-GeneID:
130803629
NCBI-ProteinID:
XP_057523805
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All DBs
Position
17:6322955..6338898
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AA seq
918 aa
AA seq
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MEQQLWRETEEKFNTSNLIGDSNNNNNNAISLQTLSSCRSLIINPSTSNLTISSILKTLI
HTLFSSNHRHYHHHIFSLLSTLSFHHPSFSPSISSSILSLSSSLISDPSSSPRLAAAALS
LLLSISAVDDLDDSLLVSLCFRPCMSVRVWFLNNALKFSIRPNLLLTVMLGFSEDPIPCV
RKAALEGLVRICDSGIFVEDSAFVEGCYFRAVELLGDQHDYVRFSAVRAVRAWGCMHAES
KPEEEIKGTCFNGVFLQICSMVRDMNVEVRVEAFTALGKIAYISGDILLQTMSKRVLGTI
KEKQSLAWCSSHMHKIHASVAAGLFVHGLEDEYSEVQQAACISLRMLPVISDQFASEAVN
ILKYGLHGDTTVRLEALKTIHHIVLSGCLKMQEENIDMLLGTLLDSSSEIRSRAFNLLES
VKLPGLKVFKSTVESLLKSVDMYPKSEAQVFCTLFSIGQNHGNYAVRIMEDFYAEIEPSS
NGKLGCNRPRVVGLLVLAISASMKHEKHFIRIPPWIFSYAAAYFGRISLALRDILDVDSL
LAYLSYCGNWHFMGHSETKTRSDILSAAKGQQEASEHVLSAVKLILQTVERLWKLVKCGC
TDEMIKALRYCKESLMTVKAGSFAHAGVVAFALQYIRIVKILTEVWEIFVVSKHCLLSEI
GDMDLLLGKLDKALLDFRYRFIGLSENVELIIMELLLLNYLLQLSSPYTHGKAFHKLCTV
FSYVCHLRNAKSIACSDFVNQFAELSYDGCLSLEATRNPIQLKKLLDLFLLKELGVSQGI
KHIKADICVLGFDSVSPLQFISGLPVAIPLEITLYNMTNDHRLWLKITLNDKLTEYFFLD
MEEYGGPGEPRQFKCTLPFYRTPEVVAFTLRISMGMECLYEDLHLWNGHGGPKHALTFIS
PEIEVDFSNLKTPQHDEC
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacagctatggcgggaaaccgaggagaagtttaacaccagcaatctcatcggc
gactccaacaacaacaacaataacgcaatctctctccaaacactctcatcatgtcgatca
cttatcatcaatccttcaacatcaaaccttacaatttcgtccattttgaaaaccctaatt
cacactctattttcctcaaatcaccgccattaccaccaccacattttctctctcctctcc
actctctcttttcatcacccttccttctcaccgtctatatcttcttccattctttctctc
tcttcctccctcatctctgacccttcctcctcccctcgcctggctgctgccgctctttct
ctcctcttgtcaatctctgccgttgatgacctcgatgacagtctccttgtatctctctgc
tttcgtccttgtatgtctgtcagggtttggttcttgaacaatgcgcttaagttttcaatt
cgtcccaatttgttgttgactgtgatgttagggtttagtgaggaccctattccttgtgtt
cgtaaagctgcattggagggcttggttcgtatttgtgattctggtatttttgtagaggat
tctgcatttgttgagggatgttattttcgtgctgttgaacttcttggtgatcagcatgat
tatgttcgcttcagtgctgttcgtgcggtgagggcatggggatgtatgcatgctgagtcg
aagccagaggaagaaattaagggtacatgtttcaatggtgtatttctgcagatctgttct
atggtcagagatatgaatgtggaggtcagggtggaggcttttactgcccttggaaaaatt
gcatatatctctggtgatattttgttgcagaccatgtcaaaaagggtccttggaacaatc
aaagaaaaacaatccttagcttggtgtagttcacatatgcataaaattcatgcttctgtt
gctgcaggtttatttgttcatggtctagaggatgaatatagtgaggtacaacaggctgcc
tgtatctccttgcgaatgcttcctgttatctctgatcaatttgctagtgaggctgttaat
atattgaaatatggtcttcatggtgatacaacggttaggctagaggctctgaagacgatt
catcatatagtactatctggatgcttaaagatgcaggaggaaaacatagatatgttgctt
ggaactcttttggacagcagttctgagatcagatccagagcttttaatttgcttgaatca
gttaagttgcctggcctgaaggtgtttaaatcaactgttgaaagcctccttaaaagtgtg
gacatgtaccccaagagtgaagcccaagttttttgtacgctgtttagtattggtcagaat
catggcaattatgcagtcagaatcatggaggacttctatgctgagattgaaccttccagc
aatgggaaactgggctgtaatagaccaagagttgttggattgctagttttagctatttca
gcttccatgaaacatgaaaaacacttcatccgaattccaccatggatattttcttatgca
gctgcatactttgggcggatctctcttgctcttcgtgatattctagatgttgattccctt
ctggcatacttgtcttactgtggtaattggcattttatggggcattctgaaaccaagact
cgatcagacatactttcagctgctaaaggtcaacaagaagcgtctgagcatgtcctcagt
gcagtaaagcttatccttcaaaccgtggaaaggttatggaagctggttaaatgtggatgc
acagatgaaatgattaaagcattaaggtactgtaaagaatctcttatgacagtaaaggct
ggttcttttgcacatgctggtgtagttgcttttgcattacaatatattcgtatcgtaaag
attctcacggaggtttgggaaatctttgtggtatccaaacattgtctattgtccgaaatt
ggtgacatggacctgttacttggaaagctagacaaagcattacttgatttcagatatagg
ttcattgggttaagtgaaaatgttgagcttattattatggagttgctgcttctcaattat
ctgctgcaactttcgagtccttatactcacgggaaagcctttcataaattatgtaccgtg
ttttcttatgtgtgccacttaagaaatgcaaaatccattgcatgctccgactttgttaac
cagtttgcagaactatcctatgatggctgcttgtctcttgaggcaactcgcaaccctatc
cagttgaaaaaactgctagacttatttttgctcaaggagttgggagtctctcaaggaatc
aagcacattaaagcagatatttgtgttctaggctttgactctgtaagtcctctgcaattc
atttcaggattgcctgtggcaattcctcttgaaattactctctataacatgacaaatgat
catagactatggctgaagattacgttgaatgacaagctgacagagtatttcttcttggat
atggaagaatatggaggccctggagagcctaggcaatttaagtgcaccttgccattctat
agaactccagaagtagttgctttcacattgagaattagtatgggtatggaatgtttgtat
gaggatttgcatttgtggaatggccatggtggccctaaacatgccctgactttcattagc
ccggaaatagaagtggatttctctaacctcaagaccccccaacatgatgaatgttaa
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