Amaranthus tricolor (tampala): 130804061
Help
Entry
130804061 CDS
T09367
Name
(RefSeq) ABC transporter I family member 19-like isoform X1
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
atri
Amaranthus tricolor (tampala)
Pathway
atri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130804061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atri03019
]
130804061
Messenger RNA biogenesis [BR:
atri03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
130804061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
nSTAND3
ORC-CDC6-like
AAA
AAA_28
AAA_15
NACHT
AAA_5
SMC_N
AAA_33
AAA_23
AAA_22
AAA_30
AAA_18
AAA_25
PduV-EutP
SRP54
Arf
Zeta_toxin
Rad17
AAA_24
AAA_16
AAA_14
TsaE
VapE-like_dom
Motif
Other DBs
NCBI-GeneID:
130804061
NCBI-ProteinID:
XP_057524351
LinkDB
All DBs
Position
17:complement(8819807..8833993)
Genome browser
AA seq
288 aa
AA seq
DB search
MSSKSAMAHENGSSIKVQAMQFAYPGQSPIFADFSLQIAPGSRCLLVGANGSGKTTLLKI
LAGKHMVGGRDVVQVLNSSAFHDTHLVCSGDLAYLGGSWSKTVSSAGEIPLQGDISAEQM
IFGVEGTDPERREKLIELLDIDLQWRMHKVSDGQRRRVQICLGLLYPFKVLLLDEVTVDL
DVVARMDLLEFLQEECDQRGATIVYATHIFDGLETWATHLAYIQEGELRRVEKLSELPEL
KSFTNLLSVVEAWLRSETKLEKKKPVSTTTSNPRSSPFGSSRHMAYYR
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcaaatcagcaatggcgcatgaaaatggaagtagcatcaaagtgcaagcgatg
caattcgcatacccaggccaatccccaatctttgccgatttcagtctccaaattgctcct
ggctctcgttgtcttcttgttggcgccaatggatccggtaagaccaccttattgaagatt
cttgctggaaagcatatggttggtggaagggatgtagtgcaggtgctgaattcttcagct
ttccatgacactcatcttgtatgtagcggtgacttggcatatttaggaggatcttggagt
aagactgttagctctgcaggtgagattcctctccaaggagatatttcagctgagcagatg
atctttggagttgaaggcactgatcctgaaagaagagagaaattaattgaactacttgat
attgatttacagtggcgaatgcataaggtatctgatggtcagcgacgacgagttcaaatc
tgtctgggtcttctttatcctttcaaggttctcttgttggacgaagttactgtcgatctt
gatgttgtagcaaggatggatttgctcgagtttttacaggaagaatgcgatcagagggga
gctacaatcgtttatgcaacccacatctttgatggtctggagacatgggcaactcatcta
gcatacatacaagaaggagaattgagaagggtagagaaattgtctgagcttcctgagttg
aagagtttcaccaatcttctttctgtggttgaggcgtggctacgttccgaaactaagctt
gagaagaagaaacctgtttccaccaccacatctaacccacgatcttcaccatttggatcg
tccagacatatggcctattataggtga
DBGET
integrated database retrieval system
