Amaranthus tricolor (tampala): 130805118
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Entry
130805118 CDS
T09367
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein GMI1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
atri
Amaranthus tricolor (tampala)
Brite
KEGG Orthology (KO) [BR:
atri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atri03036
]
130805118
03400 DNA repair and recombination proteins [BR:
atri03400
]
130805118
Chromosome and associated proteins [BR:
atri03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
130805118
DNA repair and recombination proteins [BR:
atri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
130805118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
HATPase_c
DUF6527
Motif
Other DBs
NCBI-GeneID:
130805118
NCBI-ProteinID:
XP_057525751
LinkDB
All DBs
Position
2:complement(5267737..5285235)
Genome browser
AA seq
1702 aa
AA seq
DB search
MNGKRRKFHTEENTNYGDETDKVYKFHVLLPNGITVDVIRRNPKDSMSLESFIHKVKEKC
FIVLRQTQSLKPMRKVLWDHKELYLQDIKGNRYRNQICFDKFMPNKTHILTLFDGAHHSI
NTFENMWDLTPDTDLLTELPDDYTFETALADLIDNSLQAVWSNGKGERRLIRVEVNEDEV
SIFDSGPGMDGSDEHSIVKWGKMGASVHRSSKKLAIGGRPPFLVPNFGMFGYGGTIASMH
LGRHAVVSAKTEESKKVYWLRLEREALLKRSGSDLNWKAAGGIRDPSDTENELSPHGSFT
KIVMKPKLKLPDIYQLQCKLKDIYFPYIQCDEISKSGRTTTLVDFQINDTNLAEIEGGEV
AVTNLNSCNGPDFVINLHLSIEEDKDASKSSGVNAVCEGNARLKCVYFPITEGKENIERI
LEKLNSDGFVIKEDFTTFSRISIRRLGRLLPEARWGLLPFMQPIKRGGNAHTLRECSSRV
KCFIDTDAGFNPIPSKTDLAPHHPFTKALKDLGAEISSREKVVKVQISRCGKELTLQRLE
REYQDWILQMHSKYDDDCNLGVDEPDVIVDASNIEELGISSGAWRVHKAISRKGKSWNRG
RKVKILKGAGPGCHKNNIFATLEYFLLEGIEENVGGEARVICRPLGVEDGDGSVLTVSND
SCPNLKLGNSISLPIMVIDSGKCTAVSDNEWNNQLNKLSLKVPSSIQILGKEHCKFLGID
GALPTDASVYAGSLRPSEVVAVLRPSNFVPSHSVNDLDQKYILRDHFEMSLDLTFKAATR
KSTKIDQIFSGTVTSSSCKGYHGLYIFSISSILGLFQKSGVYTFSFRIKKSAASQCAIEC
EKVVKVNASPNVKRWELSKNDHNVPLSVSVGSSFPSLSIARYDGYDNIIPFKVTPKIEFQ
LISNSIVLSPKRSTKVELSIDKSHMKVSNTRITTDKLDNIRPSYEATLALSQPNDKKPFL
SIPCQVFPGPPHFVRFHMSESGKELLPNEVVYDMRLEVLDRHHNHVQGGTEIELDLYGFS
FMDEIGRKRKVDDDGFIDLNDLLRVTGSYGNPVSLTVISNEKTIAYKKFQVEMRQLRLAT
MVPEVCQPGSTLKDLSFEVVDSIGTVDTTVHDSEKYAFHTLRIMSDFGGVESIRYAFKHG
RCIIPSITLPYKDGCFFIKASHSHHAELQLKFQVIDFFIRLIYSFALYFIFITIASRFTS
QISVSSSFVEPRATSHVQASKQYSLNESFAPHSVSDAPGEFHELEATIINSQREPDCDVV
LPLRTQSLNHGVSASDINFVPATGKVSPLAESKVQKQSALAETPEKYHRNYGFNDDIIDS
PVALITGADTYTPERAISLTGPDLLMDFESIENDFFRSASEIKCLENDLKWCVLHKEELE
ENLTQLQASKELLPALDHISPKEVVLDKIEKKVDSAASIYSIASRNVRLKNQHLEFIADV
VGLVALLATVSTPELSRSLAEYLGEDQMLAIVCQSNVALTMPDRYKDVLMSLASELGQRI
KHRQHIICLEDLSTYAGGVLETDPQRRLALPNPILLDGTTPHGFLGYAVNLIDIVAEHRQ
TKTVTGHGLRETLFYRLFRELQVYKTNIDMILARGCITDGAISLDGGAIHGKGIINLLNG
EIGVCFPIVLRDPELVMEKMKSDIDLAEKAIDVISQRRSAKLKIFYEKKDQYTKIIEDKE
IVQKLKLLENTRMSSSPFLLKP
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtaaaaggagaaagtttcatactgaagaaaacactaattatggtgatgaaact
gataaagtgtacaaatttcatgttcttctaccaaatggaattactgttgatgtgattaga
aggaacccaaaagattctatgtctttagaatcattcatacataaagttaaggaaaaatgc
ttcattgttttgaggcaaacacagagtttgaaacccatgagaaaggttttatgggatcat
aaggagttgtatttacaagatattaagggtaatcggtaccggaatcaaatatgttttgat
aagtttatgcctaacaaaactcatattttgacactttttgatggtgctcatcactcgatt
aataccttcgagaacatgtgggatttaaccccagataccgatttgttgaccgagctccca
gatgattacacatttgagactgccctggctgatttgattgacaattccttgcaggcagtg
tggtctaatggcaaaggcgaaaggaggctgataagagttgaggttaacgaggatgaggtt
tccatattcgactctgggcctggcatggacggaagtgatgagcattcaatagtgaagtgg
ggaaaaatgggtgcttccgttcaccgatcatccaaaaaacttgctattggcggaagacct
ccgtttctcgtgcctaactttgggatgtttggatacggtggtacaattgcttctatgcat
ttaggaaggcatgctgtagtgtctgcaaaaaccgaggagtctaagaaagtttattggctt
cgtttggagagggaagctttacttaaacgatctggttctgatcttaactggaaggctgct
ggtggaatccgagatccatcagacacggagaatgaattatcccctcatggtagttttaca
aagattgtcatgaagcctaagttgaaactacccgatatataccaacttcagtgcaaactc
aaggatatttattttccttacattcagtgtgacgagatttcaaagtcagggaggactaca
acattggtggacttccagattaacgacaccaatttagctgaaattgaaggtggtgaagtg
gcagtgacgaatttgaattcttgtaatggcccagactttgttattaaccttcatttgtct
attgaagaagacaaggatgcatctaaatcttcaggtgtaaatgctgtttgtgaaggaaac
gcgcgcctgaagtgtgtttactttcccattactgagggcaaggagaatattgaaagaatt
ttggaaaaactgaattctgatggttttgtaattaaagaagactttacaaccttcagccgt
atatccatcaggcggttgggtcgtctgcttcctgaagctcgctgggggctgctacctttt
atgcaacccattaagaggggaggcaatgctcacacattgagggaatgctcctcaagagtc
aaatgcttcatcgatactgatgctggttttaatccaataccttccaagactgatctagcg
cctcatcacccttttactaaagcattgaaggatttgggggctgaaatttcttcgagagaa
aaggtggttaaggttcagatttcaagatgcggaaaggaattgacgttgcaacgactggaa
agggagtatcaagattggattctccagatgcatagtaaatacgatgacgattgcaacctt
ggtgttgatgaacccgatgtgattgttgatgcatctaacatagaagaactgggcatatca
tctggtgcttggagggttcataaagctatcagtcggaagggaaaatcttggaatagagga
cgaaaagtaaagattctcaaaggtgcagggcctggttgtcataagaacaacatttttgca
acattagagtattttttactcgaaggcattgaagaaaatgttggcggagaggcacgagtt
atatgccggccacttggcgttgaggatggagatggtagtgtgctcacagtttcaaacgat
tcttgtccaaacttaaaacttggaaactctatatctctgcccatcatggtgatagattcg
ggaaagtgtactgctgttagtgacaatgaatggaacaaccaacttaacaagctgagtctg
aaagttccttcatcaattcaaatattaggaaaagaacactgcaaattcttgggtattgac
ggggcattacctacagatgcttcagtttatgctgggtcactacgtccatcagaagtcgta
gctgttctacggccttcaaattttgttccaagtcatagtgttaatgacttggatcaaaaa
tacattttgagggaccattttgagatgtccctggatttaacatttaaggctgcaactaga
aaatccaccaagatagaccaaattttttcaggaactgttacaagttcgtcatgtaaagga
taccatggtttgtatatattttcaataagctccatcctgggtttatttcaaaaatctggg
gtgtatacattctccttccgaataaaaaaatctgctgcgtcacaatgtgccattgagtgt
gaaaaagttgtaaaagtcaatgcgtcgccgaatgtcaaacgctgggaactctcaaaaaat
gaccacaatgtgccattgagtgtgagcgtaggttcttctttcccatcattgtcaattgca
cgatatgatggatatgacaatatcattccatttaaagttaccccaaagatagaattccag
ttgatttccaacagcattgtgctttccccaaagagaagcacaaaggtggaactttcaata
gataagtctcatatgaaagtttcgaatacacggataactactgataaattagacaatatt
cgcccaagttatgaagccacattggctttgtctcagcctaatgataaaaagccattttta
agcattccatgtcaagtttttcctggacctccacattttgtccgcttccatatgtcagag
tcaggcaaagaattacttcccaatgaggtggtttacgacatgagactggaggtgctagat
agacatcataatcatgtgcaagggggcacagaaatagagcttgacctttatggtttctct
ttcatggatgagattggtcgaaagcgaaaggttgatgatgatggctttattgatcttaat
gaccttttgagggtcactggaagttatggtaatccagtgtcccttaccgtcatttctaat
gagaagaccattgcttacaaaaagtttcaagttgaaatgcgtcaactgaggttggcgaca
atggtccctgaagtttgtcaacctgggtcaactctaaaagacctatcctttgaagttgtt
gattctatcggaactgttgatacaaccgtacatgattcagagaaatacgcatttcacaca
cttagaataatgtcagactttggaggcgttgaatcgataagatatgcctttaagcacgga
cgatgcattattccttcaattactcttccgtataaagatggatgttttttcatcaaggct
tctcactcccatcacgcagaactacagttgaagtttcaggttatagatttcttcataagg
ctcatctattcatttgctctttacttcatttttattacgattgcatcccgcttcacttcg
cagatttcggtctcaagttcatttgtagagcctcgtgctacatctcatgtccaagcttca
aaacagtattccctgaatgaaagttttgctccccattcagtttctgatgctccaggcgag
tttcacgaattggaggctaccattataaattctcaaagggaaccggactgtgatgttgtg
ttgcccctccgaactcaaagtctgaaccatggggtttctgcttcagatattaactttgtt
cccgcgacaggaaaggtttccccgttagcagagtcaaaagtgcaaaagcagtctgctctt
gcagaaactccagagaagtatcatcgaaattatgggtttaacgatgacataatcgattct
ccggttgctttgatcactggtgctgatacttatactcctgagcgtgcaattagtttgaca
ggacccgacttgttgatggactttgagagcatagaaaatgattttttccggagtgcatct
gaaataaaatgtttagaaaatgacttgaaatggtgcgtcttacacaaggaggaactcgaa
gaaaatttgacgcagttgcaagcttccaaggaactgctgccagcgctagatcacatctct
ccgaaggaagtggtgctggataaaatagaaaagaaggttgattcagccgcgtccatatac
agcattgcttcaaggaatgtgcgactaaagaatcaacaccttgaatttatcgctgatgtg
gttggcttagttgcccttcttgcaacagtttcaacacccgaacttagtcgttcattggcg
gagtatttaggagaagatcaaatgctagcaatcgtttgccaatccaatgtcgcattgact
atgccagataggtataaagacgtcctcatgtccttagccagtgagttagggcaacgcatc
aagcaccgtcaacatattatatgtctcgaggacttaagtacatatgctggcggtgttcta
gaaactgatcctcaaagacggttggctttaccaaatccgatcttactagatggaacgacc
ccacatggcttcttaggttatgctgtcaatttaattgacattgttgctgaacatcgtcaa
actaagacagtcacagggcatggactacgcgaaaccttattttatagactcttcagggag
ctccaagtttataaaacaaatatcgacatgatattagcacgcgggtgtatcaccgatgga
gcgatatctctagacggaggtgctatacatggaaagggcataatcaatctcctaaacggg
gaaatcggtgtttgtttccctattgttctacgcgatcctgaattggttatggagaaaatg
aaatcggacatagatttagcagagaaagctatcgacgtaatcagtcaacgtaggagtgca
aagttgaagatattctacgaaaagaaggatcaatacacgaagattatcgaggacaaagaa
atagtgcaaaaacttaaactactcgagaatactcgaatgagttcgtcacccttccttttg
aagccatga
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integrated database retrieval system
